Jatropha Genome Database
- JcCA0080281.40
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0080281.40 + phase: 0
(2172 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008794 pentatricopeptide repeat-containing protein, putative 1435 0.0
>30174.m008794 pentatricopeptide repeat-containing protein, putative
Length = 3492
Score = 1435 bits (724), Expect = 0.0
Identities = 1683/2000 (84%), Gaps = 2/2000 (0%)
Strand = Plus / Plus
Query: 162 ctccactaaaaccaagaaggctaaatccattgcgcgactcataaacaccaaatcatggtc 221
|||||| ||||||||||| ||||||||||| ||||||||||| ||| ||||| | |||||
Sbjct: 150 ctccacaaaaaccaagaaagctaaatccatggcgcgactcatcaactccaaaccctggtc 209
Query: 222 aagtgagctagagtcttctctctcatctctttctccctcattttctaaaaccactggctt 281
|| |||||| |||||||| || |||||||| ||||| ||| | || ||||| || | |||
Sbjct: 210 aactgagctcgagtcttcactttcatctctctctccttcaatatcaaaaactaccgtctt 269
Query: 282 ccaagttcttcgccttatcaaagttccatcaaaagcccttaaattcttcaattggcttcc 341
||||||||||||| || ||| ||||||||||||||| |||||||||||||| ||
Sbjct: 270 tgaagttcttcgcctcattaaaaccccatcaaaagcccttcaattcttcaattgggcccc 329
Query: 342 tcaaatgggtttcacccacaatgaccaatcctatttcttgatgttagaaatcttgggtcg 401
|| | || ||||| ||||| |||||||| ||||| || ||| ||||||||||||||||
Sbjct: 330 agaattagggttcactcacaacgaccaatcgtattttttaatgctagaaatcttgggtcg 389
Query: 402 cgctcggaaccttaatgtagcgcgtaatttcttgttttccatcaagagaaagtctaatgg 461
|||| |||| || |||||||| ||||||||| | || ||||| || |||| ||| |||||
Sbjct: 390 cgctaggaatctcaatgtagcccgtaatttccttttctccattaaaagaaggtcgaatgg 449
Query: 462 gacggttaagcttgaggacaggttctttaatagcttaatcagaagttatggtcgagctgg 521
||| ||||||||||| || |||||||||||||||||||| || ||||||||| ||| ||
Sbjct: 450 gactgttaagcttgaagataggttctttaatagcttaattaggagttatggtaaagccgg 509
Query: 522 gttgtttcaagagtctgtaaagctttttacttcgatgaaatctgttggagtttccccatc 581
| |||||||||| |||||| || |||||| ||||||||| || ||||| |||||||||||
Sbjct: 510 gctgtttcaagaatctgtacaggtttttaattcgatgaagtcagttggggtttccccatc 569
Query: 582 tgtggttacatttaatagtcttttgttgattttgcttaaacgtggacgcaccaatatggc 641
||||||||||||||||||||||||| ||||||| |||||||||||||| || ||||||||
Sbjct: 570 tgtggttacatttaatagtcttttgctgattttacttaaacgtggacgtacaaatatggc 629
Query: 642 caagagtgtattcgacgaaatgctgagcacgtatggtgttgcgcctgatacatatacctt 701
||||||| || || |||||||| ||||| ||||| ||| | |||||||| ||||| ||
Sbjct: 630 tcagagtgtgtttgatgaaatgcttagcacatatggcgttacacctgatacctatacttt 689
Query: 702 taacattctgattagagggttctgcaagaattcaatggttgatgacgggtttaggttttt 761
||| || ||||||||||||| || |||||||| ||||| ||||| ||||||||||||||
Sbjct: 690 taatatattgattagagggttttgtaagaattctatggtcgatgaagggtttaggttttt 749
Query: 762 ccagaaaatgtcgagttttaactgtgatcctgatattgtgacttataatacgcttgttga 821
| ||||||| ||||||| |||||||||||| |||| ||||||||||| || |||||
Sbjct: 750 taaagaaatgtctcgttttaaatgtgatcctgatcttgtaacttataatactctcgttga 809
Query: 822 tggggtgtgtagagcaggaaaggttaagacagcacacaatgtggttaaggggatggttaa 881
||| ||||||| ||||| |||||||| | ||| || ||||||||||| |||||||||||
Sbjct: 810 cgggttgtgtagggcagggaaggttaatatagctcataatgtggttaatgggatggttaa 869
Query: 882 gaaaagtgaagatttgaatcctgatgttgtttcttacaccactttgcttagaggatattg 941
|||||| |||||||||||||||||||| |||| || |||||| ||||||| |||||
Sbjct: 870 gaaaagcaccaatttgaatcctgatgttgttacttatactactttggttagagggtattg 929
Query: 942 tatgaagcaaaatattgatgaggctttggttgtttttgaagagatggtcgacaaaggatt 1001
||||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 930 tatgaagcatgagattgatgaggctttggttgtttttgaagaaatggtaagtaaaggatt 989
Query: 1002 gaaaccaaatgcagttacttataacacgcttattaaaggcctttgtgaagtccagaagat 1061
|||||||||| | ||||||| ||||| |||||||| || |||||||| || ||||||||
Sbjct: 990 aaaaccaaatgaaattacttacaacacacttattaagggtctttgtgaggtgcagaagat 1049
Query: 1062 tgataagatcaaagaggttttggagggagccttggaggttggaggattttctcctgatac 1121
||||||||||||| | |||| |||||||| || | || ||| |||||| ||| |||||
Sbjct: 1050 tgataagatcaaacaaatttttgagggagctttagggggtggtggatttattccagatac 1109
Query: 1122 ctgtactttgaatacattgatgaatggacattgcaatgcagggaatttgaacgaggc-ct 1180
|| ||| | || ||||||||||||| |||||| ||||| ||||||||||| || || ||
Sbjct: 1110 atgcactcttaacacattgatgaatgcacattgtaatgcggggaatttgaatgatgctct 1169
Query: 1181 tgaaggtttttgagaagatgatggagtggaaggtccagccagattctgctacgtacagtg 1240
|| ||||||| ||||||||||||| || ||| || | ||| ||||||||||| || ||||
Sbjct: 1170 tg-aggttttcgagaagatgatggtgttgaatgttcggcccgattctgctacttatagtg 1228
Query: 1241 ttctggttaggaacttgtgtcacataggggactttgagagagcagagaaattgtatgacg 1300
|| || ||||||| |||||||| | |||| ||||||||||||||||| | |||| ||| |
Sbjct: 1229 ttttgattaggaatttgtgtcaaagagggaactttgagagagcagagcagttgtttgatg 1288
Query: 1301 agctgctaaagaagggcattttattaagagatgatggtagtacgcctcttgttgcagcct 1360
| || |||||| ||||| |||||||||||||| |||||||||| |||||||| |
Sbjct: 1289 aactatcggagaaggaaattttgttaagagatgatgggtgtacgcctctagttgcagcat 1348
Query: 1361 acaaatccatgtttcagtttttgtgtaaaaatgggaagactagcaaggcagaaagggggt 1420
||||||||||||| |||| ||||||| ||||||||||||| ||||||||||| | ||
Sbjct: 1349 acaaatccatgttcgagttcttgtgtagaaatgggaagactgcaaaggcagaaagagtgt 1408
Query: 1421 tcaggcaactaatgaaaaggggaacacaagatcctacttcttacaagattttgataatag 1480
| || || ||||||||||||||||||||||||||| ||||| ||||||| |||||| |
Sbjct: 1409 ttagacagctaatgaaaaggggaacacaagatcctctttctttcaagattctgataaagg 1468
Query: 1481 ggcattgtaaggaaggcacatttgaagctggctacgagctcttggtcttaatgttaagaa 1540
|||| || | |||||| ||||||||||| || || |||||||||||||| ||||| ||||
Sbjct: 1469 ggcactgcagggaaggtacatttgaagcggggtatgagctcttggtcttgatgttgagaa 1528
Query: 1541 gaaattttgatcctgattctgagatctaccagtcgctgattgatggtctcttgcagaagg 1600
| |||||| || ||| ||| | ||| ||||| |||| |||||||||||||||||||
Sbjct: 1529 gggattttgtgccagatcttgaaacctatcagtcattgatcgatggtctcttgcagaagg 1588
Query: 1601 gtgagcctcttcttgcttaccagactctacagaagatgctaaagagctccattgttccta 1660
|||| |||||| |||| ||||||||||| |||||||| ||||||||||| ||| |||
Sbjct: 1589 gtgaacctcttgttgcctaccagactcttgagaagatgataaagagctcccatgtccctg 1648
Query: 1661 caacttctactttccattctatacttgcaggacttctgaaaaagggttatgcccatgaat 1720
|||||||||||||||||| ||||||||| |||||||| ||| |||| |||||||||||
Sbjct: 1649 aaacttctactttccattcaatacttgcaagacttctggcaaaaggttgtgcccatgaat 1708
Query: 1721 cagctagccttgtagtattattgttggagggtaaaattagacaaaatgttaccctatcaa 1780
|||| || || || | || |||||||||| ||||| |||||||| | | ||||| |
Sbjct: 1709 cagcaaggtttataatgttgatgttggagggaaaaatcagacaaaacataaatctatcga 1768
Query: 1781 cacatactgtaagattactctttagcaatggactgcgagataaaggatttcggattgttg 1840
|||||||||| ||||||||||| ||| ||||||||| ||||| | |||| ||||||||
Sbjct: 1769 cacatactgtgagattactcttcggcagtggactgcgtgataaggcatttaagattgttg 1828
Query: 1841 ggctactttatgataacgggtacatggttgacatgaaagaattgattattttcctttctc 1900
| ||||||||| ||| ||||| ||||||||||| |||| |||||| ||||||||| |
Sbjct: 1829 gtttactttatgctaatgggtatgtggttgacatggaagagttgattggtttcctttccc 1888
Query: 1901 agagtagaaagttacttgaggcaaacaaattgttgctattttgtctggagaaacatcaca 1960
| | ||||||||| || |||| |||||||||| ||||||||| ||||||||||||| |
Sbjct: 1889 ataatagaaagtttctactggcacacaaattgttactattttgtttggagaaacatcaga 1948
Query: 1961 atattgatattgatatgtgcaacacagtaattgaaggtctttgtaaaatgaagaagcttt 2020
|| | ||||||||||||||| ||||||||||||||||||||||||||||||| | | ||
Sbjct: 1949 atgtcgatattgatatgtgcgacacagtaattgaaggtctttgtaaaatgaaaagacatt 2008
Query: 2021 cagaagcatttgggttgtactatgaattggtggagaaaggcaatcatcaaccgctgagtt 2080
|||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| |
Sbjct: 2009 cagaagcatttgggttgtactatgaattggtggagaaaggcaataaccaaccactgagat 2068
Query: 2081 gcctagaaaatttgagagttgccttagaagctgggggaagatcaaaagaagtagagtttc 2140
|||| || ||| |||||||||||||||||||| ||||||||| | |||||||| ||||||
Sbjct: 2069 gccttgagaatctgagagttgccttagaagctaggggaagattagaagaagtaaagtttc 2128
Query: 2141 tatctaagaggatgccaaat 2160
|||| |||||||||||||||
Sbjct: 2129 tatccaagaggatgccaaat 2148