Jatropha Genome Database

JcCA0080281.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0080281.30 - phase: 0 
         (279 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008761 Nonspecific lipid-transfer protein A, putative           90   8e-18
30174.m008763 Nonspecific lipid-transfer protein A, putative           90   8e-18
30174.m008760 Nonspecific lipid-transfer protein A, putative           66   1e-10
28644.m000935 Nonspecific lipid-transfer protein B, putative           58   3e-08

>30174.m008761 Nonspecific lipid-transfer protein A, putative
          Length = 342

 Score = 89.7 bits (45), Expect = 8e-18
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                       
Query: 7   atgccaggagaggctgtggattgtgggcaagtgaattcggctttggccccttgcattccc 66
           ||||||||||||||||||||||||||||||||||| ||| | |||||| |||||||||| 
Sbjct: 55  atgccaggagaggctgtggattgtgggcaagtgaactcgtccttggcctcttgcattcca 114

                        
Query: 67  ttcctgactggag 79
           ||| |||| ||||
Sbjct: 115 ttcttgacaggag 127


>30174.m008763 Nonspecific lipid-transfer protein A, putative
          Length = 348

 Score = 89.7 bits (45), Expect = 8e-18
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                       
Query: 7   atgccaggagaggctgtggattgtgggcaagtgaattcggctttggccccttgcattccc 66
           ||||||||||||||||||||||||||||||||||| ||| | |||||| |||||||||| 
Sbjct: 55  atgccaggagaggctgtggattgtgggcaagtgaactcgtccttggcctcttgcattcca 114

                        
Query: 67  ttcctgactggag 79
           ||| |||| ||||
Sbjct: 115 ttcttgacaggag 127


>30174.m008760 Nonspecific lipid-transfer protein A, putative
          Length = 324

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 111/137 (81%)
 Strand = Plus / Plus

                                                                       
Query: 7   atgccaggagaggctgtggattgtgggcaagtgaattcggctttggccccttgcattccc 66
           ||||||||||| ||| | ||||| ||||| ||||| ||  | |||||| ||||||| || 
Sbjct: 43  atgccaggagaagctatagattgcgggcaggtgaactcttccttggccgcttgcatccca 102

                                                                       
Query: 67  ttcctgactggagcagatactgctccatcagcagcatgctgcggtggaatcaagaatttg 126
           | ||||||||| |||||  ||||||| || ||  ||||||| | |||  |||||||||| 
Sbjct: 103 tacctgactggtgcagacgctgctccttctgcttcatgctgtgctggggtcaagaattta 162

                            
Query: 127 aaggcgcttgctccaac 143
           ||||| |||||||||||
Sbjct: 163 aaggcacttgctccaac 179


>28644.m000935 Nonspecific lipid-transfer protein B, putative
          Length = 348

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 120 gaatttgaaggcgcttgctccaaccacagccgataggcgagctgcgcgcgactgtgttaa 179
           ||||||||||  ||||||||| ||||| || ||| || ||| |||  |||||||||||||
Sbjct: 174 gaatttgaagaggcttgctccgaccaccgctgatcggagagttgcatgcgactgtgttaa 233

                    
Query: 180 ggctgctgc 188
           |||||||||
Sbjct: 234 ggctgctgc 242