Jatropha Genome Database
- JcCA0080281.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0080281.20 + phase: 0
(969 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008764 conserved hypothetical protein 533 e-151
30174.m008762 conserved hypothetical protein 78 1e-13
>30174.m008764 conserved hypothetical protein
Length = 963
Score = 533 bits (269), Expect = e-151
Identities = 789/961 (82%), Gaps = 6/961 (0%)
Strand = Plus / Plus
Query: 9 ttggaaaggtattctaaaggttccagtggacccaaccagcagaagttactgcagagttgc 68
||||| |||| ||||||||||||||||||| | | |||||||| |||||||||||||||
Sbjct: 9 ttggagaggtgttctaaaggttccagtggattctagcagcagaaattactgcagagttgc 68
Query: 69 tgtatctctctgcctctcgcctagttctaaatcactaacagtaccctcagcaaatgccat 128
||||||||||||||| || |||| | ||| ||||| || || || | |||||||||||
Sbjct: 69 tgtatctctctgcctgtctcctaatactagatcaccaattgtgccttgtgcaaatgccat 128
Query: 129 cttcttttctggagatagagttgaagggaccgagaatccggtgattgagagactatctga 188
|||||||| |||||||||||||||||| ||| | || || || || ||||| ||||||||
Sbjct: 129 cttcttttgtggagatagagttgaaggcaccaacaacccagtaatcgagaggctatctga 188
Query: 189 tctgcagaaaatagccgaaattttggtctctaaatttggtggttctgttaatgcttgggt 248
|| |||||| ||||| || ||||||||||||||||||||| | ||||||||||||||||
Sbjct: 189 tccgcagaatatagctcaagttttggtctctaaatttggtgctcctgttaatgcttgggt 248
Query: 249 tattgaagcttcaagtttcaatggcccttttgctgtttataaagatttcattccatctgt 308
|| || ||||| | ||||||||| ||||| |||||||||| ||| || |||||||||||
Sbjct: 249 aatcgaggcttccattttcaatggacctttcgctgtttatagagactttattccatctgt 308
Query: 309 gaattgttggggggaaccaaaatcctatagcccagctggattcccagcttctacttcaac 368
|||| ||||||||||||||||| || | |||| || |||||| |||||||| |||||
Sbjct: 309 gaatcagtggggggaaccaaaatcttacattccagatgaattccctgcttctacctcaac 368
Query: 369 catctcactcttatcaaattgcattagagaggcaaaaaaggtcatttcaacaaaagagaa 428
| |||| |||||||| |||||| | | ||| || || |||| |||||| |||| | ||
Sbjct: 369 cctctctctcttatccaattgcctcaaagaagccaagaaggccatttcgacaacaaag-- 426
Query: 429 agatccaatttctgcgagtgcatcatcagcttctttttacgagcccaaaacatacatcct 488
|||| | || || | |||| |||| | || |||||||| || ||||| ||
Sbjct: 427 ---tccaccggccgc-agcttagcatcttcttcatgttgtgagcccaagacgtacattct 482
Query: 489 tggattcagcaagggtggcattgtgcttaaccagctagtagctgagttgagtgtttcaga 548
||| || || || || |||| ||||||||||||||| ||||| ||| |||| |||||| |
Sbjct: 483 tgggtttagtaaaggcggcactgtgcttaaccagctggtagcagagctgagcgtttcaca 542
Query: 549 agtaaaattaaattcaaaagagcagcatatgaacaggaaatgttcccaagaagacattca 608
||| ||| ||| | ||||| ||||| |||| ||| |||||| | ||||| ||||
Sbjct: 543 agtgcaatcaaacacgaaagaacagcagatgatcagaggatgttctgatgaagatgttca 602
Query: 609 aatcataccacgcagtaaagaaagtcttctaaacagcattacagagatccattatgtgga 668
||| || |||| ||||||||||| ||| ||||||||||||||||||| |||||||||||
Sbjct: 603 aattatcccacttagtaaagaaagccttttaaacagcattacagagatacattatgtgga 662
Query: 669 tgtgggtttaaactcggctggtgcatatatcactgaccataatgtgattgagagaatctc 728
||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 663 tgtgggtttgaactctgctggtgcatatatcactgatcataatgtgattgagagcatctc 722
Query: 729 aaaacgtctcacgcaaggagctccaggaatccgtttcgtccttcatggaacacccaggca 788
|||||| | | |||||| ||||||||||| ||||| ||||||| ||||| || |||||
Sbjct: 723 caaacgtgtaatgcaaggggctccaggaattcgttttatccttcacggaacgcctaggca 782
Query: 789 atggtgtgatagcaggcgagttttgatacgtaatgaaaaagacaagttagttcatctact 848
|||| | ||||||||||| |||||||||||||| ||||||||||| || || |||| ||
Sbjct: 783 atggggagatagcaggcgcgttttgatacgtaaagaaaaagacaaattgattaatcttct 842
Query: 849 tcagtctgaagctagaaggagcggagggaaactaaaggtgtgtgaaaagttttatttcgc 908
||| |||||||| ||| ||| ||||||||| ||||||| ||||| ||||||||||| ||
Sbjct: 843 tcaatctgaagcccgaaagagtggagggaaattaaaggtctgtgagaagttttattttgc 902
Query: 909 tgataggcctccagatttgcaaatgcactttgaaataattcaaagtatggatgttagttg 968
||| || |||| ||||||| ||||| |||||||| ||| ||| ||||||||||||||
Sbjct: 903 tgacagagctcccaatttgcagatgcattttgaaatcattgaaaacatggatgttagttg 962
Query: 969 a 969
|
Sbjct: 963 a 963
>30174.m008762 conserved hypothetical protein
Length = 180
Score = 77.8 bits (39), Expect = 1e-13
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 769 cttcatggaacacccaggcaatggtgtgatagcaggcgagttttgatacgtaatgaaaaa 828
|||||||| || || ||||||||||| ||||||||||| || || ||||||||||||| |
Sbjct: 66 cttcatggcacgccaaggcaatggtgcgatagcaggcgcgtatttatacgtaatgaaaca 125
Query: 829 gacaagttagttcatctacttcagtctgaagctagaaggagcggagggaaa 879
||||| || | | |||| ||||| | ||||||| ||| ||| |||||||||
Sbjct: 126 gacaaattggataatcttcttcaatgtgaagctcgaaagagtggagggaaa 176
Score = 52.0 bits (26), Expect = 6e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 122 atgccatcttcttttctggagatagagttgaagg 155
||||||||||||| | ||||||||||||||||||
Sbjct: 1 atgccatcttcttctgtggagatagagttgaagg 34