Jatropha Genome Database
- JcCA0079341.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0079341.20 - phase: 0
(1968 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004471 dtdp-glucose 4,6-dehydratase, putative 874 0.0
29607.m000233 NAD dependent epimerase/dehydratase, putative 100 6e-20
>29848.m004471 dtdp-glucose 4,6-dehydratase, putative
Length = 1110
Score = 874 bits (441), Expect = 0.0
Identities = 876/1021 (85%)
Strand = Plus / Plus
Query: 36 gatcctcattactggttcagccggtttcatagcttcccatgtgaccaacaggttgatgac 95
|||||| || |||||| |||| ||||||||||| || ||||||||||| |||||||| |
Sbjct: 36 gatccttataactggtgcagctggtttcatagcctcgcatgtgaccaataggttgataag 95
Query: 96 aaactatcctaactacaaaattgttgcccttgacaagttagattattgctctaatctcaa 155
|| || ||| |||||||||| |||||||||||||| ||||| || ||||||| || |
Sbjct: 96 gaattaccctgactacaaaatcgttgcccttgacaaattagactactgctctagccttag 155
Query: 156 gaaccttaatccctctcgatcctctccaaacttcaaatttgttaagggtgatattgctag 215
|||||||| ||| | ||| ||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 156 gaaccttactccatgtcggtcctctccaaatttcaagtttgtgaagggcgatattgctag 215
Query: 216 cgcggatcttgtaaaccacctgttgattgctgaagatattgatacgattatgcactttgc 275
|| ||||||||||| ||||| ||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 216 tgctgatcttgtaaatcacctcttgatagctgaagatatcgatactattatgcactttgc 275
Query: 276 tgctcaaacccatgtggataattcttttgggaactcctttgaattcactaccaacaatat 335
||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 276 tgcccaaacccatgtggataattcttttgggaactcttttgaattcaccaccaacaacat 335
Query: 336 ttatggtagtcacgtgctccttgaagcctgcaaggttaccaagctagtaagaaggttcat 395
|||||| | ||| || || |||||||| |||||||| || ||| | | | ||||||||
Sbjct: 336 ttatggcactcatgttcttcttgaagcatgcaaggtcactaagaaaatcaagaggttcat 395
Query: 396 tcacgttagtaccgatgaagtttatggtgaaactgacatggagactgatattggcaatcc 455
||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 396 tcatgttagtacagatgaagtttatggagaaactgacatggagactgatattggcaatcc 455
Query: 456 tgaggcatctcagcttcttcctacaaatccttactctgccacaaaagctggggctgaaat 515
|||||| |||||||| ||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 456 tgaggcttctcagctccttcctacaaacccatactcagccacaaaagctggggctgaaat 515
Query: 516 gcttgtaatggcttaccatcgatcttatggccttcctttaattacaactagaggcaataa 575
|||||| |||||||||||||||||||||||||||||| |||||| || ||||||||||
Sbjct: 516 gcttgtcatggcttaccatcgatcttatggccttcctacaattaccacccgaggcaataa 575
Query: 576 tgtatatggtcctaaccaatacccggaaaagcttatccccaaactcattctcctcgccat 635
||||||||| |||||||| || || ||||| ||||| || ||| ||||| |||| || ||
Sbjct: 576 tgtatatggccctaaccagtatccagaaaaacttattccaaaattcattatccttgcgat 635
Query: 636 gaaaggcgagcagttgcctgtccatggtaatggctcaaatgtgagaagctatttacattg 695
||| || || || || || | ||||| |||||||||||||||||||||||| | || ||
Sbjct: 636 gaagggtgaacaattaccaattcatggcaatggctcaaatgtgagaagctatctgcactg 695
Query: 696 tgacgatgttgcagaggcatttgatgtgatccttcacaaaggggtgattggacatgtata 755
||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||
Sbjct: 696 tgaagatgttgcagaggcatttgatgtgatacttcacaaaggggctattggacatgtcta 755
Query: 756 taatatcgggactaagaaggagagacgagttctagatgttgcccaggatatatgcaagct 815
|||||| || || ||||| ||||||||||| ||||||| || ||||||| || | |||
Sbjct: 756 taatattggaaccaagaaagagagacgagtgttagatgtggcagaggatatctgtaggct 815
Query: 816 gtttggactggatgctacaaaatccataagttttgttcaagataggcctttcaatgacca 875
||| |||||||||| | ||| | || || || ||||||||||||||||||||||| ||
Sbjct: 816 gttcagactggatgccaagaaagctatcaggttcgttcaagataggcctttcaatgatca 875
Query: 876 gagatatttcttagatgatcaaaagctcattaagcttgggtggcgggaaagaacaccctg 935
|||||||||||||||||||||||||||| || || ||||||| ||||| || || ||
Sbjct: 876 aagatatttcttagatgatcaaaagctcaagaaactggggtggcaagaaaggactccttg 935
Query: 936 ggaagaagggctaaagatgacaatagaatggtacaccaagaacccaaattggtggggtga 995
|||||||||| | ||||||||||| || |||||||| ||||| |||||||||||||| ||
Sbjct: 936 ggaagaagggttgaagatgacaatggagtggtacacaaagaatccaaattggtggggcga 995
Query: 996 tgtatctgctgctctccgtccacatcctcgtgtctcattggtagttcattctgatgatga 1055
||| ||||||||||||| ||| ||||||||| | ||| ||||||| ||||| |||||||
Sbjct: 996 tgtttctgctgctctccatccgcatcctcgtatttcaatggtagtccattcgaatgatga 1055
Query: 1056 t 1056
|
Sbjct: 1056 t 1056
>29607.m000233 NAD dependent epimerase/dehydratase, putative
Length = 1869
Score = 99.6 bits (50), Expect = 6e-20
Identities = 266/338 (78%)
Strand = Plus / Plus
Query: 1252 aggccaacccatgtgtttaatgctgctggtgttactggaaggcccaatgtcgattggtgt 1311
|||||||||||||| |||||||| |||||||| ||||| || || ||||| |||||||||
Sbjct: 1153 aggccaacccatgtttttaatgccgctggtgtcactggcagacctaatgttgattggtgt 1212
Query: 1312 gagtcgcataagacagaaacgattaggactaatgtcgtaggtacactaactttggccgat 1371
|| || || || |||||||| ||| | || ||||| || || | || || || |||
Sbjct: 1213 gaatcccacaaaacagaaaccattcgcaccaatgtttctggaaccttgacattagctgat 1272
Query: 1372 gtttgcagagaaaacaacttattgatgatgaatttcgcaactggctgcatatttgagtat 1431
||||||||||| | || | |||||||||||||| || || ||||| ||||||||||||
Sbjct: 1273 gtttgcagagagcataatctcttgatgatgaattttgctacaggctgtatatttgagtat 1332
Query: 1432 gataaagagcatccagaaggttcaggtattggattcaaagaagaagacaagccaaacttt 1491
||| | |||||||| || || || ||||| | | ||||| ||||| || || |||
Sbjct: 1333 gatgctgctcatccagagggctctggcattgggtatactgaagatgacaaacccaatttt 1392
Query: 1492 acaggttccttctattccaagactaaagccatggtagaagagcttttaaaagaatacgaa 1551
|| ||||| || || || ||||| || |||||||| |||||| | || |||||||| ||
Sbjct: 1393 actggttctttttactcaaagacaaaggccatggttgaagagttattgaaagaatatgac 1452
Query: 1552 aatgtatgcactttgagagttcgaatgccgatatcatc 1589
||||||||||| | |||||| ||||||| ||||||||
Sbjct: 1453 aatgtatgcacgctaagagttagaatgccaatatcatc 1490
Score = 69.9 bits (35), Expect = 6e-11
Identities = 194/247 (78%)
Strand = Plus / Plus
Query: 97 aactatcctaactacaaaattgttgcccttgacaagttagattattgctctaatctcaag 156
||||||||| | ||||||||||||| |||||||||| | ||||| || || || || ||
Sbjct: 85 aactatcctgattacaaaattgttgtccttgacaagcttgattactgttcaaacctgaaa 144
Query: 157 aaccttaatccctctcgatcctctccaaacttcaaatttgttaagggtgatattgctagc 216
||||| ||||||| ||| || || ||||| || ||||| ||||| ||||||| |||
Sbjct: 145 aacctccttccctctaaatcatcacccaactttaagtttgtcaagggggatattggcagc 204
Query: 217 gcggatcttgtaaaccacctgttgattgctgaagatattgatacgattatgcactttgct 276
|| || ||||| ||| ||| | || ||||| ||||| || |||||||||||||||
Sbjct: 205 gctgaccttgtcaacttccttctcatcactgaatccattgacactattatgcactttgct 264
Query: 277 gctcaaacccatgtggataattcttttgggaactcctttgaattcactaccaacaatatt 336
|| |||||||||||||| || || ||||| ||| |||||| || || | || ||||||
Sbjct: 265 gcccaaacccatgtggacaactcctttggtaacagctttgagtttaccaagaataatatt 324
Query: 337 tatggta 343
|||||||
Sbjct: 325 tatggta 331
Score = 56.0 bits (28), Expect = 8e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 456 tgaggcatctcagcttcttcctacaaatccttactctgccacaaaagctggggctgaaat 515
|||||| ||||| || ||||| || || || |||||||| ||||||||||| || |||||
Sbjct: 444 tgaggcttctcaactccttccaactaacccatactctgcaacaaaagctggtgcggaaat 503
Query: 516 gcttgtaatggc 527
|||||| |||||
Sbjct: 504 gcttgttatggc 515