Jatropha Genome Database
- JcCA0079011.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0079011.10 + phase: 0 /partial
(1347 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30131.m007254 conserved hypothetical protein 420 e-117
>30131.m007254 conserved hypothetical protein
Length = 1533
Score = 420 bits (212), Expect = e-117
Identities = 501/597 (83%), Gaps = 9/597 (1%)
Strand = Plus / Plus
Query: 564 tgatgaaaataaacaattgcaaaatttgagtgataagataataaagatggacactaacag 623
||||||||||||||| || ||| | |||| || |||||||||||||||||||| |||||
Sbjct: 759 tgatgaaaataaacagtttcaacaaatgagcgacaagataataaagatggacacaaacag 818
Query: 624 tcaaagaagatgggatggaagcattttgacaaaggaggaagcagaagcattgtttcttag 683
||||||||||||||| ||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 819 tcaaagaagatgggacggaagcatttttactaaggaggaagcagaagccttgtttcttag 878
Query: 684 caagaaagaggctgcaatgaagagagaaaggataaaagaatactcctttaatcaccgcaa 743
||||||||| ||||| || |||||||||||||||| ||||||| |||| |||||||| ||
Sbjct: 879 caagaaagatgctgcgatcaagagagaaaggataagagaatacgccttcaatcaccggaa 938
Query: 744 ttcagcagaaactgagaggaacaagagcaatgggagttggagatattggctagagaactg 803
||||||||| |||||||||||||| ||||| || ||||| || ||||| ||| | ||
Sbjct: 939 ctcagcagaatctgagaggaacaaggtgaatggaaggtggaggtactggctggagcaatg 998
Query: 804 ggtagatactcaagttactaaaagtaacgagctagaagatttggatacaattataacttc 863
||| ||||||||||| | |||||||| || ||||||||||||||||| || |||||||
Sbjct: 999 ggtggatactcaagtatcaaaaagtaaggaattagaagatttggatacagttctaacttc 1058
Query: 864 aacaccaaagccaagagtagaatacaattataaagggaaaaaactgagattgagaggttt 923
|||||||||||||||||| ||| |||| ||||||| | || | ||||||| ||
Sbjct: 1059 aacaccaaagccaagagtggaa------tatagagggaaacagcttaagctgagaggctt 1112
Query: 924 acaaaaacagtataacgtagaaggaacagagtctccaaccgcagcagctccaagaagatc 983
||| | |||||||||| | |||||| ||| |||| | ||||||||||| ||||||
Sbjct: 1113 acagagacagtataacattgaaggactagattctc---cgttagcagctccaaaaagatc 1169
Query: 984 atttcacagaaggcagtgctcgctaggggaagaaaatcccttctcaacgtcacctgtgat 1043
|| ||||||| ||| ||||| |||||||||| ||| ||||||| | ||| ||| | |
Sbjct: 1170 gttccacagaaagcaatgctcattaggggaagacaattccttctccaggtctcctatcgt 1229
Query: 1044 tccaacttacatggctgcaaccgaatctgcaaaggcaaaagcaagatcaatgagctcacc 1103
|||||||||||||||||| || ||||| || ||||| |||||||||||| ||||||||||
Sbjct: 1230 tccaacttacatggctgccacagaatccgccaaggccaaagcaagatcattgagctcacc 1289
Query: 1104 gaagctaaggccaggaacctgtgatgcatattctgatagctattccccatgtaagaa 1160
||||||||||| |||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 1290 aaagctaaggcctggaagttgtgatgcatactctgatagctactccccatgcaagaa 1346
Score = 194 bits (98), Expect = 1e-48
Identities = 173/198 (87%)
Strand = Plus / Plus
Query: 354 tcatcaatatgagaaggagatcaaagaaatttcagccattaaaattcaagctgcctttcg 413
|||||||| ||||||| | ||| ||||| || | ||||||||||||||| |||| |||||
Sbjct: 516 tcatcaatgtgagaagaaaatccaagaatttgctgccattaaaattcaaactgcttttcg 575
Query: 414 gggttatcttgccaggaaagctctgcgagcactcaaagggatagtgaagcttcaagctat 473
||||| |||||| |||||||| |||| ||||| || |||||||||||||||||||| ||
Sbjct: 576 gggttttcttgcaaggaaagcgctgcacgcactgaaggggatagtgaagcttcaagcgat 635
Query: 474 tattcgagggcgaaatgtgagacgccaggctatcaagactctgaaatgcttgcaatccat 533
|||||||||||||| ||||||||||| || || || ||||||||||||||||| |||||
Sbjct: 636 cattcgagggcgaaacgtgagacgccaagcaatgaatactctgaaatgcttgcagtccat 695
Query: 534 tgtaaatatacagtcaca 551
||||||||| ||||||||
Sbjct: 696 tgtaaatatccagtcaca 713
Score = 115 bits (58), Expect = 7e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 10 aagaggaactggttcaatctagtgagaaagtttttcatttcagacacacctgcaaagcaa 69
||||||| ||||||||||||| | || | |||||||| | ||||||||| | ||| |||
Sbjct: 202 aagaggagctggttcaatctaataaggaggtttttcactccagacacacagggaaatcaa 261
Query: 70 gaaaagaaggacaaaagaagaaaatgggttttatttggaagggtgaaggtgaaaagcaga 129
||||||||| |||| ||||||||||||||||| ||||||| | |||| |||||||||||
Sbjct: 262 gaaaagaagaacaagagaagaaaatgggttttctttggaaagatgaaagtgaaaagcagg 321
Query: 130 ttaccctcactctcagcaccatcaccaccaagag 163
|||| | | ||||||||||||||||||||||
Sbjct: 322 ctaccacccatttcagcaccatcaccaccaagag 355
Score = 73.8 bits (37), Expect = 2e-12
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 1225 caaaggtctccaagcttgaaggggcttccaggtcctgtcaaatctaacacacctttcaaa 1284
||||||||||||||||||||| ||||| |||||||| ||||||||| | | |||
Sbjct: 1411 caaaggtctccaagcttgaagaaccttcctggtcctgtaaaatctaaccggacactgaaa 1470
Query: 1285 gatctgagctttgattctgaatgctctttcaggacttggaatcaa 1329
||||| |||||||||||||| ||||| ||| |||||||| |||||
Sbjct: 1471 gatctcagctttgattctgagtgctcattccggacttgggatcaa 1515