Jatropha Genome Database

JcCA0078491.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0078491.10 - phase: 0 /partial
         (312 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27985.m000861 conserved hypothetical protein                          100   9e-21

>27985.m000861 conserved hypothetical protein
          Length = 813

 Score = 99.6 bits (50), Expect = 9e-21
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                       
Query: 143 ggtgcagaaagaacacaactttacccgccaggaagctcctaattcgagctgccaggactg 202
           |||||||||||| || | |||||||| | || |||||  || || ||||||| || ||||
Sbjct: 146 ggtgcagaaagatcaaagctttacccactagaaagctgatagttagagctgctagaactg 205

                                                                       
Query: 203 agtctcaaggtgtgttcttaggcttcagaccgcccaattttgagcttccagagcctctta 262
           |||| ||||||||    ||||| |||||| ||||| |||||||| | | ||||||| | |
Sbjct: 206 agtcacaaggtgtcaatttaggattcagagcgccccattttgagttgcaagagcctttaa 265

                                                             
Query: 263 ctgggaaaacgtggaaactggacgattttgagtcgtatcctgctttattg 312
           |||||||||  ||| |||| || |||||||||||||||||||||||||||
Sbjct: 266 ctgggaaaatttgggaacttgaagattttgagtcgtatcctgctttattg 315