Jatropha Genome Database

JcCA0078121.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0078121.10 + phase: 0 /partial
         (492 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

36771.m000012 longevity assurance factor, putative                    381   e-105
30138.m003858 hypothetical protein                                    100   2e-20

>36771.m000012 longevity assurance factor, putative
          Length = 798

 Score =  381 bits (192), Expect = e-105
 Identities = 264/288 (91%)
 Strand = Plus / Plus

                                                                       
Query: 181 ctggatgttgagacagatgagagaaagaagaagataagaaaattcaaggaatctgcttgg 240
           |||||||||||| ||||||| |||||||| ||||||  |||||||||||| |||||||||
Sbjct: 52  ctggatgttgagtcagatgaaagaaagaaaaagatacaaaaattcaaggagtctgcttgg 111

                                                                       
Query: 241 aaatgcgtttattttctttcaggagagattctagctttgactgttacttataatgagcct 300
           |||||| | ||||| ||||| |||||| |||| ||  ||| |||||||||||||||||||
Sbjct: 112 aaatgcatgtatttcctttcgggagaggttctggccctgagtgttacttataatgagcct 171

                                                                       
Query: 301 tggtttactaacacaaagtacttttgggtagggccaggaaatcaagtctggccagaccaa 360
           |||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 172 tggtttactaacacgaagtacttttgggtagggccaggagaccaagtctggccagaccaa 231

                                                                       
Query: 361 aaaatgaagttaaaactgaaaggagtatatatgtatgctgctggattttacacatactcc 420
           ||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 232 aaaatgaagttaaaattgaaagcagtgtatatgtatgctgctggattttacacatactcc 291

                                                           
Query: 421 atttttgctctgatattctgggaaacaaggcgctcagactttggggtg 468
           || |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 292 atatttgctctgatattttgggaaacaaggcgttcagactttggggtg 339


>30138.m003858 hypothetical protein
          Length = 195

 Score = 99.6 bits (50), Expect = 2e-20
 Identities = 101/118 (85%)
 Strand = Plus / Plus

                                                                       
Query: 17  acgtgaaatcaattgaatgggagaatgaatcataccctgcttatgaagattacattgttc 76
           |||| |||||||||||||||||| ||||||| || |||||||||||||| ||||||||||
Sbjct: 17  acgtaaaatcaattgaatgggagtatgaatcgtatcctgcttatgaagactacattgttc 76

                                                                     
Query: 77  ttcctctctttgctctgttcttcccctctgttcgcttctttctcgatagatttgtatt 134
           ||||  | |||||||| ||||| ||  ||||| | ||||| || || |||||||||||
Sbjct: 77  ttccattatttgctctcttctttcctactgttagattcttccttgacagatttgtatt 134