Jatropha Genome Database
- JcCA0077901.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0077901.10 + phase: 1 /partial
(1313 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29588.m000852 metal transporter, putative 1176 0.0
29648.m002004 metal transporter, putative 64 2e-09
29648.m002003 metal transporter, putative 58 1e-07
>29588.m000852 metal transporter, putative
Length = 1641
Score = 1176 bits (593), Expect = 0.0
Identities = 920/1029 (89%)
Strand = Plus / Plus
Query: 1 gaaagcatttagcagaacactgtaaagctgaatatcctagggtgccaaacttcatccttt 60
|||||||||||||||||||||| | |||||| ||||||||||| ||||| |||||||
Sbjct: 326 gaaagcatttagcagaacactgcaggattgaataccctagggtgcccaactttatccttt 385
Query: 61 ggattcttgctgaaattgctattgttgcatgtgatattcctgaagtgattggtacagcct 120
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 386 gggttcttgctgaaattgctattgtagcatgtgatattcctgaagtgattggtacagcct 445
Query: 121 ttgcattgaacatgctcttcaggattccaatttggattggtgttcttctgactgggctta 180
||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 446 ttgcattgaacatgctcttcaaaattccagtttggattggtgttcttctgactgggctta 505
Query: 181 gtacactagttcttctagcattgcaacgatatggggtccggaagcttgaattcttgattg 240
||||| | ||||||||||||| || | ||||||||||||||||||||||||| | ||||
Sbjct: 506 gtacattgattcttctagcattacagcaatatggggtccggaagcttgaattccttattg 565
Query: 241 cttttctcgtattcacaattgctgtatgctttttcgtggagcttggctatgcaaagcctg 300
||||||| ||| | ||||| |||| |||||||| | |||||||||||||||||||||||
Sbjct: 566 cttttcttgtacttacaatggctgcgtgcttttttgcggagcttggctatgcaaagcctg 625
Query: 301 ctgctaatgaagttttatatgggctttttgttccccaacttaagggagatggtgctactg 360
|||| ||||||| | | ||||||||||||||||||||||||||||||||||| || |
Sbjct: 626 ctgcacctgaagttctggaagggctttttgttccccaacttaagggagatggtgccacgg 685
Query: 361 gccttgcaatttcacttcttggtgccatggttatgccgcacaatctcttcctccattcag 420
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 686 ggcttgcaatttcacttcttggtgccatggttatgccgcacaatctcttcctccattctg 745
Query: 421 cattggtgctttccaggaaaatccctcgatctgtccgtggtatcaaggaggcttgcagat 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 746 cattggtgctttccaggaaaatccctcgatctgtccgtggtataaaggaggcttgcagat 805
Query: 481 attacttaatagaaagtgcctttgctctcgcagtggcctttctcattaatgtgtccgtta 540
|||||| || |||||||| ||||||||| ||||||||||||| ||||||||||| ||||
Sbjct: 806 tttacttcattgaaagtgcttttgctctctcagtggcctttcttattaatgtgtctgtta 865
Query: 541 tttctgttagtggtgctgtttgcaattcctcaaatttaaatgctgaagatcagtcaaact 600
| ||||| ||||||||||||||||||||| |||||||||| ||||||||||||| || |
Sbjct: 866 tatctgtaagtggtgctgtttgcaattccccaaatttaaaccctgaagatcagtcgaaat 925
Query: 601 gcaaggacttggacttgaacaaggcttcatttttgcttaaaaatgttttaggcagttgga 660
| | || |||||||||||||||||||| ||| ||||||||||||||||||| |||||||
Sbjct: 926 gtgaagatttggacttgaacaaggcttcctttctgcttaaaaatgttttaggtagttgga 985
Query: 661 gttcaaaactttttgcaattgctttgctggcatcaggtcagagttctaccataacaggga 720
||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |
Sbjct: 986 gttcaaagctttttgcaattgctttactggcatcaggccagagttctaccataacaggaa 1045
Query: 721 cttatgcagggcagtatgtcatgcagggttttttggatctacgattgacaccatggatac 780
||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||
Sbjct: 1046 cttatgcagggcagtatgtcatgcagggtttcctggatctacgattagtaccatgggtac 1105
Query: 781 gaaactttctaactcgatgcttggcaatagtccctagtttaattgttgcactcattggtg 840
| || || || |||||||||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 1106 gcaatttccttactcgatgcttggcaatagttcccagtttaatcgttgcacttgttggtg 1165
Query: 841 gctctagtggggctggaaaactaattattattgcatcgatgattctatcatttgagctcc 900
| ||| |||||||||||| |||||||| ||||||||||||||||| |||||||| || |
Sbjct: 1166 gttctgctggggctggaaagctaattatcattgcatcgatgattctttcatttgaactgc 1225
Query: 901 cttttgctcttattccacttcttaaattcactagctgcaaaaccaagatggggatgtacg 960
|||||||||||||||| ||||| || ||||| |||||||||||||||||||| || |
Sbjct: 1226 cttttgctcttattccccttctcaagttcaccagctgcaaaaccaagatgggagcatatg 1285
Query: 961 ccaactcaactacgatttcagccctaacttggcttgttggttccttaatcatgtcaataa 1020
||||||||| | ||||||||||| | |||||| | |||||||||| |||||| |||||
Sbjct: 1286 ccaactcaattgcgatttcagccatcacttggatcattggttccttgctcatgttaataa 1345
Query: 1021 atgtatact 1029
|||| ||||
Sbjct: 1346 atgtgtact 1354
>29648.m002004 metal transporter, putative
Length = 1587
Score = 63.9 bits (32), Expect = 2e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 861 ctaattattattgcatcgatgattctatcatttgagctcccttttgctcttattccactt 920
||||| || |||||||||||||| || |||||||| || || ||||||||||| ||||||
Sbjct: 1162 ctaatcatcattgcatcgatgatactctcatttgaacttccatttgctcttatcccactt 1221
Query: 921 cttaaatt 928
|| |||||
Sbjct: 1222 ctcaaatt 1229
>29648.m002003 metal transporter, putative
Length = 1497
Score = 58.0 bits (29), Expect = 1e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 870 attgcatcgatgattctatcatttgagctcccttttgctcttattccacttcttaaattc 929
|||||||||||||| || |||||||| || || ||||||||||| || ||||| ||||||
Sbjct: 1210 attgcatcgatgatactctcatttgaacttccatttgctcttatcccccttctcaaattc 1269
Query: 930 a 930
|
Sbjct: 1270 a 1270
Score = 56.0 bits (28), Expect = 6e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 705 tctaccataacagggacttatgcagggcagtatgtcatgcagggttttttggatct 760
||||| |||||||| || |||||||| || ||| ||||||||||||| ||||||||
Sbjct: 1045 tctactataacaggcacatatgcaggacaatatatcatgcagggtttcttggatct 1100