Jatropha Genome Database

JcCA0077351.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0077351.10 + phase: 0 
         (822 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29933.m001400 conserved hypothetical protein                          408   e-113

>29933.m001400 conserved hypothetical protein
          Length = 741

 Score =  408 bits (206), Expect = e-113
 Identities = 358/408 (87%), Gaps = 3/408 (0%)
 Strand = Plus / Plus

                                                                       
Query: 382 gaggcagagcgtatattgcttagacatgccctagaggatcctcggaatgaacgttttgtt 441
           ||||| |||||||||||||| |  |||||  || ||||||||  ||||||||||||||||
Sbjct: 7   gaggcggagcgtatattgctaatgcatgcattacaggatcctaagaatgaacgttttgtt 66

                                                                       
Query: 442 ttcctctcagacagctgcatacctctttacaacttcagctacacgtatgactatatcatg 501
           |||||||||||||||||||||||||||||||||||  |||| || ||||| |||||||||
Sbjct: 67  ttcctctcagacagctgcatacctctttacaactttggctatacttatgaatatatcatg 126

                                                                       
Query: 502 tcaacatcaactagttttgtagacagcttttctgatacaaaagagggccgctacaatccg 561
           |||||||| |||||||| |||||||||||| ||||||  |||||||| || |||||||| 
Sbjct: 127 tcaacatcgactagtttcgtagacagctttgctgataacaaagagggtcgttacaatcca 186

                                                                       
Query: 562 aaaatggcttcagtcattcctgtttataactggaggaaaggatcacagtgggttgttctg 621
           ||||||| | |||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 187 aaaatggatccagtcattcctgttcataactggaggaaaggatctcagtgggttgttctg 246

                                                                       
Query: 622 accaaaaagcatgcaaaggttgtcgtgaatgacactgtagtctttcctttgtttcaacag 681
           || | |||||||||| ||||||| ||||||||||||  |||||||||| | || ||||| 
Sbjct: 247 actagaaagcatgcagaggttgtagtgaatgacactacagtctttcctatattccaacat 306

                                                                       
Query: 682 cattgcaagaggaaatcactgcctgagttttggcgggatagcccc---cttgtaaataca 738
           ||||||||||||| ||| || |||||||||||||||||| |||||   | ||   |||||
Sbjct: 307 cattgcaagaggagatcgctacctgagttttggcgggatcgcccctttcctgctgataca 366

                                                           
Query: 739 tcgaaggagcacaattgtatacctgatgaacattatgtgcagacatta 786
            | ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 367 gccaaggagcacaattgtatacctgatgaacattatgtccagacatta 414