Jatropha Genome Database
- JcCA0076481.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0076481.10 + phase: 0
(828 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014109 conserved hypothetical protein 373 e-102
>30147.m014109 conserved hypothetical protein
Length = 750
Score = 373 bits (188), Expect = e-102
Identities = 364/423 (86%), Gaps = 6/423 (1%)
Strand = Plus / Plus
Query: 376 tataaccctgtggaacggagaattaagggtggaaaggaccgtaacagcaagggttgtcct 435
||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 301 tataatcctgtggaacggagaattaagggtggaaaggatcgtaattcaaagggttgtcag 360
Query: 436 aagacctcaaaatcactgcaatcaaacattatgcacaattctgcttctggcgaaccagtt 495
|||||||||||||||||||||||||||| ||||||||| |||| | || ||||||
Sbjct: 361 aagacctcaaaatcactgcaatcaaacaatatgcacaactctg------gggagccagtt 414
Query: 496 ggcctgagtaaaacttctgggccaaagcctggaaggggatctgctgtggcaggtggggct 555
||||||||||||| ||||| ||||||| || |||||| | ||||||||||||| |||
Sbjct: 415 ggcctgagtaaaatgtctggaccaaagcaagggaggggaagtactgtggcaggtggagct 474
Query: 556 aattcttcggcggagattgagactttatcaaaggagataactgatctcaagctttcagta 615
|||||||| | ||||||| ||||||| || ||||| | ||||| || ||||| || ||
Sbjct: 475 aattcttcagtggagattcagactttgtctaaggaagtcactgacctgaagctctctgtg 534
Query: 616 gaccatttggaaaaagagagagatttttacttcgcaaagctacgggatattgaaatactt 675
||||||||||||||||| ||||| |||||||| |||||| || ||||||| ||| ||||
Sbjct: 535 gaccatttggaaaaagaaagagacttttactttgcaaagttaagggatatagaactactc 594
Query: 676 tgtcaaactcctgaattggaggatatcccaatggcagttgcaatcaagaagatactgtat 735
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| | |||
Sbjct: 595 tgtcaaactcctgaattggaggatatcccgatggcagtggcaattaagaagatattatat 654
Query: 736 gctgcagatgctaaggaatccgcacttgaagaagctcaagaatatttgaatcaagctttg 795
||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct: 655 gctgcagatgcaaaggaatctgcacttgaagaagctcaagaatatttatatcaagctatg 714
Query: 796 aat 798
|||
Sbjct: 715 aat 717
Score = 333 bits (168), Expect = 1e-90
Identities = 237/260 (91%)
Strand = Plus / Plus
Query: 1 atggcatcgaatatagggatgatggatagtgcatattttgttggaaggaatgagatttta 60
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 atggcatcaaatatagggatgatggatagtgcatattttgttggaaggaatgagatatta 60
Query: 61 acctggatcaacaataggcttcagctcaacctcactcgcatcgaagaggctgcatccggt 120
|| |||||||||||||||||||| ||||| || ||||||| |||||||||||||| |||
Sbjct: 61 acatggatcaacaataggcttcaactcaatctttctcgcattgaagaggctgcatctggt 120
Query: 121 gccgtgcaatgtcagatgatggacatgacctatccaggagttgttcccatgcacaaggtg 180
|| ||||| |||||||||||||| ||||| ||||| ||||||||||| ||||||||||||
Sbjct: 121 gctgtgcagtgtcagatgatggatatgacttatccgggagttgttcctatgcacaaggtg 180
Query: 181 aattttgatgcgaagacagaatatgatatgatccaaaattacaaggttttacaggaggtg 240
|| |||||||||||||| ||||| |||||||| ||||||||||||||| | ||||| ||
Sbjct: 181 aactttgatgcgaagacggaatacgatatgattcaaaattacaaggttctgcaggatgta 240
Query: 241 ttcaacaagttgaaaattga 260
||||||||||||||||||||
Sbjct: 241 ttcaacaagttgaaaattga 260