Jatropha Genome Database
- JcCA0076441.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0076441.10 + phase: 0
(660 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29678.m000505 acetolactate synthase, putative 412 e-114
29929.m004506 acetolactate synthase, putative 125 4e-28
>29678.m000505 acetolactate synthase, putative
Length = 1482
Score = 412 bits (208), Expect = e-114
Identities = 331/372 (88%)
Strand = Plus / Plus
Query: 228 aaaggttaggagacatactatctctgtgtttgttggcgatgaaagtggaatgattaatcg 287
|||||||||||| ||||| || ||||| |||||||| ||||||||||| ||||||||| |
Sbjct: 258 aaaggttaggaggcatacgatttctgtctttgttggggatgaaagtggtatgattaatag 317
Query: 288 aattgcaggggtttttgcgagaaggggatataatattgagtcgcttgctgttggtctgaa 347
||||| || |||||||| || || || ||||| |||||||| |||||||||||| | ||
Sbjct: 318 gattgctggcgtttttgcaaggagagggtataacattgagtctcttgctgttggtttaaa 377
Query: 348 caaggataaggcccttttcaccattgttgtctctggaactgaaaaagtgctacaacaagt 407
|||||| ||||| ||||| ||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 378 caaggacaaggctctttttaccattgttgtttctggaactgaaagggtgctacaacaagt 437
Query: 408 tgtagagcagcttcagaaacttgtcaatgttttaaaggttgaagatctctccagtgagcc 467
||| ||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||
Sbjct: 438 tgttgagcagcttcagaaactagtcaatgttatgaaggttgaagatctctccagtgagcc 497
Query: 468 acaggtagaacgggagctgatgcttataaaagtgaatgcagatcctaattatcgtgctga 527
||| |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 498 acaagtagaacgcgagctgatgcttataaaagtgaatgcagatcctagttaccgtgctga 557
Query: 528 gatcaagtggttggttgaaattttcagagcaaaaattgtggatatctcagagcactcagt 587
||| | ||||||||| | |||||||||||||||||||||||||||||||| ||||| |
Sbjct: 558 gattatgtggttggtgggcattttcagagcaaaaattgtggatatctcagaacactcttt 617
Query: 588 cacaattgaggt 599
|||||||||||
Sbjct: 618 aacaattgaggt 629
>29929.m004506 acetolactate synthase, putative
Length = 1596
Score = 125 bits (63), Expect = 4e-28
Identities = 263/327 (80%), Gaps = 2/327 (0%)
Strand = Plus / Plus
Query: 256 tttgttggcgatgaaagtggaatgattaatcgaattgcaggggtttttgcgagaagggga 315
||||||||||||||||||||||| || || || ||||| || |||||||| ||||| |||
Sbjct: 391 tttgttggcgatgaaagtggaataataaaccggattgccggcgtttttgctagaagagga 450
Query: 316 tataatattgagtcgcttgctgttggtctgaacaaggataaggcccttttcaccattgtt 375
| ||| |||||||| ||||| ||| |||||||| | || ||||| || || || || |||
Sbjct: 451 tttaacattgagtcccttgccgtttgtctgaacgaagacaaggctctctttactatagtt 510
Query: 376 gtctctggaactgaaaaagtgctacaacaagttgtagagcagcttcagaaacttgtcaat 435
||| ||||||||| || || | |||||| |||||||||||| | || ||||||| |
Sbjct: 511 gtccgtggaactgacaatgtcttgagacaagtagtagagcagcttaacaagcttgtcagt 570
Query: 436 gttttaaaggttgaagatctctccagtgagccacaggtagaacgggagctgatgcttata 495
|| ||||||| |||||| |||| || || ||||| |||||||| || || ||||| ||
Sbjct: 571 gtcataaaggtggaagatatctcaagagaaccacaagtagaacgtgaacttatgctcatc 630
Query: 496 aaagtgaatgcagatcctaatta-tcgtgctgagatcaagtggttggttgaaattttcag 554
||| | ||||||||||| ||| | || |||||||| |||| | || || || |||||
Sbjct: 631 aaacttaatgcagatcc-aatgacccgccatgagatcatgtggctagtggacatcttcag 689
Query: 555 agcaaaaattgtggatatctcagagca 581
||||||| |||||||||||||||||||
Sbjct: 690 agcaaaagttgtggatatctcagagca 716