Jatropha Genome Database
- JcCA0075831.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0075831.20 - phase: 0
(1539 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m013794 DELLA protein RGL1, putative 1292 0.0
29929.m004746 DELLA protein GAI1, putative 105 8e-22
>30147.m013794 DELLA protein RGL1, putative
Length = 1581
Score = 1292 bits (652), Expect = 0.0
Identities = 1015/1136 (89%)
Strand = Plus / Plus
Query: 404 ctgatggagtgaggcttgttcagcttttaattgcttgtgctgaagcagtggcttgtcgcg 463
||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| |
Sbjct: 446 ctgatgggatgaggcttgttcagcttttaattgcttgtgctgaagctgttgcttgtcggg 505
Query: 464 acaagtctcatgcctctgccttattgtctgagcttcgatctagtgctctggtctttggct 523
| ||||| |||||||| ||| | || || |||||||| || |||||| | ||||||||||
Sbjct: 506 ataagtcacatgcctcagccctgttatccgagcttcggtccagtgctttagtctttggct 565
Query: 524 cttctttccagcgtgtagcatcttgctttgtccaaggccttgctgatagactgtccttgg 583
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||
Sbjct: 566 cttctttccagcgtgtagcatcttgctttttccaaggccttgctgataggctgtctctgg 625
Query: 584 ttcaaccgctagggacggtaggtttcgttgtaccaatgatgaacataatggacattgctt 643
||||||| |||||||| || |||| ||| |||||| |||||||||||||||||||| |
Sbjct: 626 ttcaacctctagggacagtcagtttagttacaccaataatgaacataatggacattgcct 685
Query: 644 ctgataagaaagaagaagctttacgccttgtttatgatatttgcccacatatccagttcg 703
| ||||||||||||||||| || ||||||||||||| |||||||||||||| ||||| |
Sbjct: 686 cggataagaaagaagaagcgttgagccttgtttatgaaatttgcccacatattcagtttg 745
Query: 704 gtcactttgtggccaattcatcaatactggaagcctttgagggagagagttttgtccatg 763
|||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||
Sbjct: 746 gtcactttgtggccaactcgtcaatattggaagcctttgagggagagagttttgtccatg 805
Query: 764 tagtggacttaggcatgacgcttgggttaccacacggacaccaatggcgccatctgatcc 823
| |||||||| || ||||| ||||| ||||||| || |||||||||||||| |||||||
Sbjct: 806 ttgtggacttgggaatgacccttggtctaccacatggtcaccaatggcgccagctgatcc 865
Query: 824 aaagcctcgctaatcgtgctggcaagctgcccagccgccttagaattactggcgtaggcc 883
|||||||||||||||||||||| |||| ||| ||||||||||||| |||| ||||| |
Sbjct: 866 aaagcctcgctaatcgtgctggaaagccaccctgccgccttagaataactgctgtaggtc 925
Query: 884 tttgtgttggtaggttccaaaccatcggtgatgagctggtggaatatgcaaaagatttag 943
|||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||
Sbjct: 926 tttgtgttggtaggtttcaaaccatcggggatgagctcgtggaatatgcaaaagatgtag 985
Query: 944 gtattaatttggaattttcagtggttgaaagcaatcttgaaaacctgcatcgtgatgata 1003
||||||||||||| || || ||||| ||||||| || ||||||||||| | |||||| |
Sbjct: 986 gtattaatttggagttctctgtggtggaaagcaccctcgaaaacctgcagcctgatgaca 1045
Query: 1004 taaaagtgtatgaaggtgaagtagttgttgtgaacagcattcttcagctgcattgtgtgg 1063
| ||||||| ||| |||||||| |||||||||||||||| || || |||||||||||||
Sbjct: 1046 tcaaagtgtttgatggtgaagttcttgttgtgaacagcatcctccaactgcattgtgtgg 1105
Query: 1064 ttaaagaaagtagaggagctttgaattctgtgttacagattattcattctctttcaccaa 1123
|||||||||| |||||||| |||||||||| || |||| ||||||| |||||||||| |
Sbjct: 1106 ttaaagaaagcagaggagccctgaattctgttttgcagactattcatgctctttcaccga 1165
Query: 1124 aacttcttgttctagttgagcaagattcaagccacaatgggccattctttcttggtagat 1183
|| |||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 1166 aaattcttgctctagtcgagcaagattcaagccacaatgggccattctttctgggaagat 1225
Query: 1184 ttatggaagcattacattactattctgcaatttttgactccttggatgctatgctcccca 1243
| |||||||| | ||||||||||| ||||| ||||| ||| ||||||| ||||| ||||
Sbjct: 1226 tcatggaagccctgcattactattcagcaatatttgattccctggatgccatgctgccca 1285
Query: 1244 ggtacgacacaagacgtgccaagatggaacagttttactttgcagaggagataaagaaca 1303
| || |||||||| || || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1286 gatatgacacaaggcgagcaaagatggaacagttttactttgcagaggagataaagaaca 1345
Query: 1304 ttgtgagctgtgagggcccagcaagggtggagcggcacgagagggtagaccagtggcgca 1363
|||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| |
Sbjct: 1346 ttgtgagctgtgaggggccagcaagggtggagcggcacgagaaggtggaccagtggcgta 1405
Query: 1364 ggagaatgagccgtgcaggatttcaggctgcaccaattaagatgttggctcaggccaagc 1423
|||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||
Sbjct: 1406 ggagaatgagccgtgcaggattccaggctgcaccagttaagatgatggctcaggccaagc 1465
Query: 1424 aatggctgggtaagaacaaggtctgtgatggctatacagttgtggaagagaagggttgct 1483
||||||| || ||||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 1466 aatggctagggaagaataaggtttgtgatggctatactgttgtggaagagaagggttgct 1525
Query: 1484 tggttcttggttggaaatcaaagcctattgttgcagcttcttgttggaaatgctaa 1539
|||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1526 tggtccttggttggaaatcaaagcctatagttgcagcttcttgctggaaatgctaa 1581
>29929.m004746 DELLA protein GAI1, putative
Length = 1524
Score = 105 bits (53), Expect = 8e-22
Identities = 329/421 (78%)
Strand = Plus / Plus
Query: 1117 tcaccaaaacttcttgttctagttgagcaagattcaagccacaatgggccattctttctt 1176
|||||||| ||||| ||||||| |||||||||||| |||| || || |||||||||||
Sbjct: 1099 tcaccaaagcttctgattctagtagagcaagattcaggccataacggaccattctttctg 1158
Query: 1177 ggtagatttatggaagcattacattactattctgcaatttttgactccttggatgctatg 1236
|| ||| ||||||| ||| | ||||||||||| || ||||||||||| | || | |||
Sbjct: 1159 ggaagagttatggaggcactgcattactattcagctatttttgactcgctagacacaatg 1218
Query: 1237 ctccccaggtacgacacaagacgtgccaagatggaacagttttactttgcagaggagata 1296
|| || | ||| ||||||| || | ||||| || || || | | || ||| || ||
Sbjct: 1219 ctgccaaagtatgacacaaagcgagtgaagatagagcaattcttttatggagaagaaatc 1278
Query: 1297 aagaacattgtgagctgtgagggcccagcaagggtggagcggcacgagagggtagaccag 1356
||||||||||| || ||||| || |||||||| ||||| || || || ||||| || ||
Sbjct: 1279 aagaacattgtcagttgtgaaggaccagcaagagtggaacgacatgaaagggtcgatcaa 1338
Query: 1357 tggcgcaggagaatgagccgtgcaggatttcaggctgcaccaattaagatgttggctcag 1416
||||||||||| |||||| | || || |||||| |||||| ||| || ||| |||
Sbjct: 1339 tggcgcaggaggatgagcagagctggctttcagcctgcacaaataaaaatggcaatgcag 1398
Query: 1417 gccaagcaatggctgggtaagaacaaggtctgtgatggctatacagttgtggaagagaag 1476
|| ||||| ||||| || ||| ||||| ||||| || ||||||||| ||||| ||
Sbjct: 1399 gcaaagcagtggctaggaaaggctaaggtttgtgagggttatacagttacagaagataaa 1458
Query: 1477 ggttgcttggttcttggttggaaatcaaagcctattgttgcagcttcttgttggaaatgc 1536
|| |||||| ||||||| |||||||||||||| || |||||||||| || |||||||||
Sbjct: 1459 gggtgcttgattcttggatggaaatcaaagccaataattgcagcttcctgctggaaatgc 1518
Query: 1537 t 1537
|
Sbjct: 1519 t 1519
Score = 71.9 bits (36), Expect = 1e-11
Identities = 117/144 (81%)
Strand = Plus / Plus
Query: 670 cttgtttatgatatttgcccacatatccagttcggtcactttgtggccaattcatcaata 729
||||| ||||| |||||||| || || || |||||| ||||||| || ||| || | ||
Sbjct: 652 cttgtctatgaaatttgcccgcagatacaattcggttactttgtagcgaatgcaaccatt 711
Query: 730 ctggaagcctttgagggagagagttttgtccatgtagtggacttaggcatgacgcttggg 789
||||||||||||||||||||||||| | | ||||| ||||| || || ||||| |||||
Sbjct: 712 ctggaagcctttgagggagagagttctattcatgttgtggatttggggatgactcttggc 771
Query: 790 ttaccacacggacaccaatggcgc 813
|| || ||||| | |||||||||
Sbjct: 772 ttgccccacggtgaacaatggcgc 795