Jatropha Genome Database

JcCA0075421.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0075421.10 + phase: 0 
         (300 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014177 clathrin coat assembly protein ap17, putative           381   e-105

>30170.m014177 clathrin coat assembly protein ap17, putative
          Length = 429

 Score =  381 bits (192), Expect = e-105
 Identities = 255/276 (92%)
 Strand = Plus / Plus

                                                                       
Query: 23  agttccgaacacacaaggtcatctacaggcgatatgctggattatttttctcgctgtgtg 82
           ||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||
Sbjct: 152 agttccgaacacacaaggtcatctacaggcggtatgctggattatttttctctctctgtg 211

                                                                       
Query: 83  ttgatataacggataatgaattggcatatttagagtgcatccatttatttgtggagatat 142
           |||||||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 212 ttgatataacagataatgaattggcatatctagagtgcatccatctatttgtggaaatat 271

                                                                       
Query: 143 tggatcatttcttcagcaacgtgtgtgagctagatttggtatttaactttcacaaggttt 202
           ||||||||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||
Sbjct: 272 tggatcatttcttcagcaatgtgtgtgagcttgatttggtattcaattttcataaggttt 331

                                                                       
Query: 203 atctgatactcgatgaattcattcttgctggggagctccaagaaacaagcaagaaggcga 262
           ||||||| || ||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 332 atctgattcttgatgaattcattcttgctggggaactccaagaaacgagcaagaaggcca 391

                                               
Query: 263 tcatagagagaatgggagaattggagaagctcgagt 298
           ||||||| || |||||||| ||||||||||| ||||
Sbjct: 392 tcatagaaaggatgggagagttggagaagcttgagt 427