Jatropha Genome Database

JcCA0075121.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0075121.10 + phase: 0 /partial
         (224 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30072.m000966 5-methyltetrahydropteroyltriglutamate--homocystein...   317   2e-86
29854.m001108 5-methyltetrahydropteroyltriglutamate--homocystein...   123   5e-28

>30072.m000966 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase, putative
          Length = 2298

 Score =  317 bits (160), Expect = 2e-86
 Identities = 208/224 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttctcacattgttggataccctcgtatgggccccaagagagagcttaagtttgca 60
           ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 1   atggcttctcacattgttggatatcctcgtatgggccctaagagagagctcaagtttgca 60

                                                                       
Query: 61  ttggaatctttttgggatgggaagagcagcgctcaggatttggaaaaggtagcatttgag 120
           |||||||||||||||||||| |||||||| |||||||| ||||||||||| |||| ||| 
Sbjct: 61  ttggaatctttttgggatggaaagagcagtgctcaggacttggaaaaggtggcatctgat 120

                                                                       
Query: 121 ctcagggaatctatctggaagcagatggctggtgctgggatcaaatacatccccagcaat 180
           ||||||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 121 ctcagggaatccatctggaagcagatggctgctgctgggatcaaacatatccccagcaat 180

                                                       
Query: 181 actttctcttactatgatcaggtgcttgacaccacagcattgct 224
           |||||||||||||| |||||||||||||| ||||||||| ||||
Sbjct: 181 actttctcttactacgatcaggtgcttgataccacagcaatgct 224


>29854.m001108 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase, putative
          Length = 2448

 Score =  123 bits (62), Expect = 5e-28
 Identities = 134/158 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttctcacattgttggataccctcgtatgggccccaagagagagcttaagtttgca 60
           ||||| || ||||||| |||||||||||| ||||| |||||||||||||| |||||||| 
Sbjct: 151 atggcgtcccacattgctggataccctcgaatggggcccaagagagagctcaagtttgct 210

                                                                       
Query: 61  ttggaatctttttgggatgggaagagcagcgctcaggatttggaaaaggtagcatttgag 120
           |||||||| || |||||||| |||||||| ||| |||||||| | ||||| ||    || 
Sbjct: 211 ttggaatcattctgggatggaaagagcagtgctgaggatttgcagaaggtggcggcagaa 270

                                                 
Query: 121 ctcagggaatctatctggaagcagatggctggtgctgg 158
           ||||||| ||| |||||||| |||||||||| ||||||
Sbjct: 271 ctcagggcatccatctggaaacagatggctgatgctgg 308