Jatropha Genome Database

JcCA0074421.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0074421.10 + phase: 1 /pseudo/partial
         (375 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29784.m000363 prolyl 4-hydroxylase alpha subunit, putative            315   1e-85
30170.m014285 prolyl 4-hydroxylase alpha subunit, putative             90   1e-17

>29784.m000363 prolyl 4-hydroxylase alpha subunit, putative
          Length = 864

 Score =  315 bits (159), Expect = 1e-85
 Identities = 324/382 (84%), Gaps = 14/382 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcatggggaaggactccaagttctccactatgaagttgggcaaaagtatgagcctcatt 60
           |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 473 agcacggggaaggacttcaagttctccactatgaagttgggcaaaaatatgagcctcact 532

                                                                       
Query: 61  ttgactatttcaatgatgagttcaataccaggaatggtggccagcgtatagctactcttc 120
           ||||||| || ||||||||||||||||| | |||||| || || ||  ||||||||||||
Sbjct: 533 ttgactactttaatgatgagttcaatacaaagaatgggggtcaacgcgtagctactcttc 592

                                                                       
Query: 121 ttatgtacct--------------aaggtggtgagacagtgtttcctgctgctgaaggga 166
           ||||||| ||              |||| |||||||| || || ||||||||  |||| |
Sbjct: 593 ttatgtatctctcagatgttgaagaagggggtgagactgtcttccctgctgccaaaggaa 652

                                                                       
Query: 167 atgttagtgatgtgccttggtggaatgagctgtctgaatgtggaaaaggagggctttctg 226
           || ||||||  || ||||||||||| ||  ||||||| || ||||||  ||| |||||||
Sbjct: 653 attttagtgcggttccttggtggaacgaattgtctgagtgcggaaaaaaaggactttctg 712

                                                                       
Query: 227 ttaaaccgaagaggggcgatgcattgcttttctggagtatgaaacctgacgcctctctgg 286
           ||||||| || | ||| |||||||||||||||||||| ||||| ||||| ||| ||||||
Sbjct: 713 ttaaaccaaatatgggtgatgcattgcttttctggagcatgaagcctgatgccactctgg 772

                                                                       
Query: 287 atccttcaagtttacatggtggttgcgctgtgattaaagggaataagtggtcagctacca 346
           ||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 773 atccttcaagtttgcatggtggttgccctgtgattaatgggaataagtggtcagctacca 832

                                 
Query: 347 agtggatgcgtgtgaatgagta 368
           ||||||||||||||||||||||
Sbjct: 833 agtggatgcgtgtgaatgagta 854


>30170.m014285 prolyl 4-hydroxylase alpha subunit, putative
          Length = 870

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 105/125 (84%)
 Strand = Plus / Plus

                                                                       
Query: 3   catggggaaggactccaagttctccactatgaagttgggcaaaagtatgagcctcatttt 62
           |||||||||||||| |||||||| || |||||||| || || ||||||||| |||||| |
Sbjct: 481 catggggaaggacttcaagttcttcattatgaagtaggacagaagtatgaggctcattat 540

                                                                       
Query: 63  gactatttcaatgatgagttcaataccaggaatggtggccagcgtatagctactcttctt 122
           || |||||   |||||||||||| || | |||||| ||||| || | ||| |||||||||
Sbjct: 541 gattattttcttgatgagttcaacactaagaatggaggccaacggacagccactcttctt 600

                
Query: 123 atgta 127
           |||||
Sbjct: 601 atgta 605