Jatropha Genome Database
- JcCA0074011.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0074011.10 - phase: 0 /pseudo
(2304 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30040.m000267 conserved hypothetical protein 2117 0.0
30131.m006948 conserved hypothetical protein 64 4e-09
>30040.m000267 conserved hypothetical protein
Length = 3063
Score = 2117 bits (1068), Expect = 0.0
Identities = 1738/1963 (88%), Gaps = 15/1963 (0%)
Strand = Plus / Plus
Query: 219 gcagcagaggtctgatgataatgggcttactttatgccaaatattgagatgtgccaagct 278
|||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||||
Sbjct: 288 gcagcagaggcctgatgataatgggcttacattatgccaaatactgagacgtgccaagct 347
Query: 279 gaacattgtggacttctttaaagagttacctcaatatgttgtcaaggctggtccaatctt 338
||| ||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||
Sbjct: 348 gaatattgtagacttctttaaagaactacctcaatatgttgtcaaggcgggtccaatatt 407
Query: 339 gagtaatatgtatggtgcagattgggagaacagacttgaggcaaaggaattgcaagccaa 398
||||| ||||||||||| |||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 408 gagtactatgtatggtgtagattgggagaacagactagaggcaaaggagttgcaagccaa 467
Query: 399 ttttgtacacttgagcattttaagcaggcactacaaacgtgcgtatcgggaacttttctt 458
|||||| |||||||| ||||||||||| |||||||| ||||| || ||||||||||||||
Sbjct: 468 ttttgtgcacttgagtattttaagcagacactacaagcgtgcataccgggaacttttctt 527
Query: 459 gacaagtgatgcaaatgttgataaacagtcggcagtttccagtgaaacagcatatttgtc 518
||| |||||||||||||||||||| || || ||| |||||||| ||||
Sbjct: 528 gacgagtgatgcaaatgttgataagcaatcagca------------acagcatacatgtc 575
Query: 519 agaatatcatcgttttggatggttgctgtttttggcactccgtgtacatgcattcagcag 578
||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 576 agactatcatcgttttggatggttgctgtttttggcactccgcgtacatgcattcagccg 635
Query: 579 atttaaagatttggtgacttgcacaaatggtttggtgtctgtgctggctgttttgatgat 638
|||||||||||||||||||||||||||||| |||| |||||||||||| ||||||| ||
Sbjct: 636 ttttaaagatttggtgacttgcacaaatggtctggtttctgtgctggctattttgattat 695
Query: 639 tcatgttccagttcactgcagaaatttcaatttgaatgactctcaatggtttgtcaagaa 698
||| ||||| |||| || |||||||||||| ||||||||||||||| | ||||| || ||
Sbjct: 696 tcacgttcctgttcgcttcagaaatttcaacttgaatgactctcaacgttttgttaaaaa 755
Query: 699 gggtgacaaaggtgttgacttgctagcatcactttgcaacaaatacgacacttctgaaga 758
|| ||||||||||||||| | || |||||||||||||||||||| ||||| || |||||
Sbjct: 756 aggcgacaaaggtgttgacctactggcatcactttgcaacaaatatgacacctcagaaga 815
Query: 759 tgagttgagaaaaacaatggagaagaccaataatttaatagcagatctcttgaaaaagaa 818
|||| ||||||||||||||||||||||||||||||||||||||||| || | || || ||
Sbjct: 816 tgagctgagaaaaacaatggagaagaccaataatttaatagcagatatcctaaagaaaaa 875
Query: 819 gccacgtttggcacctgagtgcaaaaatgaaaacctggatgatatcaatccagatggttt 878
||| | | ||||| |||||| |||||||||||||||||| | || ||| ||||||||||
Sbjct: 876 gccccatatggcatctgagtataaaaatgaaaacctggataacataaatacagatggttt 935
Query: 879 gatttattatgaagatttaatggaagagtcatcattgcagaccagtttaagtattttaga 938
||| ||||||||||||||||||||||| |||||| ||| | ||||||| |||||||||
Sbjct: 936 gatctattatgaagatttaatggaagaatcatcactgcggtccagtttggatattttaga 995
Query: 939 gaaggattacgatgatgcaatacgttgtaagggtgaactagatgagagggtatttatcaa 998
||||||||| || |||||||| || |||||||| ||||| || ||||| |||||||||||
Sbjct: 996 gaaggattatgaagatgcaattcgctgtaagggcgaactggacgagagagtatttatcaa 1055
Query: 999 tgatgaagacagcttacttggttcaggaagcctatctggaggtgccataaatgtaactgg 1058
|| |||||||| ||||| || ||||| ||| ||||||||||||| || | |||||||||
Sbjct: 1056 cgaggaagacagtttactcggctcaggcagcttatctggaggtgctattagtgtaactgg 1115
Query: 1059 caccaagagaaaatttgatcagatgtcctcaccaacaaagacaattacaagtccgctttc 1118
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 1116 aaccaagagaaaatttgatcagatctcctcaccaacaaagacaattacaagtcccctttc 1175
Query: 1119 ttgccatcaatcccctgcatctcatgcaaatggcatttttggcagcacaaatcctaagat 1178
| |||| ||||| || || ||| ||||||||||| |||| ||||||||| ||| |||
Sbjct: 1176 tcctcatcgttccccggcttcacatacaaatggcattcttggtagcacaaattctaggat 1235
Query: 1179 ggctgccacgcctgtaagcacagcaatgacaactgcaaagtggcttcgtactgttatttc 1238
|||||| || ||||| |||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 1236 ggctgctacacctgtgagcacagcaatgacaactgcgaagtggctgcggactgttatttc 1295
Query: 1239 tccacttccatcaaaaccatcggcacagttagaacgctttcttgcatcatgtgataggga 1298
||| |||||||| ||||| || ||||| | |||||||||||||||||||||||||||||
Sbjct: 1296 tccgcttccatccaaaccttcaccacagctggaacgctttcttgcatcatgtgataggga 1355
Query: 1299 tgtaactaatgatgtcatacgtagagcacagataatgttggaggctatatttccaagcag 1358
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct: 1356 tgtaactaatgatgtcatacgtagagcacacataatattggaggctatatttccaagtaa 1415
Query: 1359 tgctctgggagagcgttgtgtaactggaagtctgcaaagtacaaagcttatggacaatat 1418
||||||||||||||||||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 1416 tgctctgggagagcgttgtgttactggaagtctgcaaagtacaaacctgatggacaacat 1475
Query: 1419 atgggcagaacaacgaagattggaagctctaaagttgtattatagggttctggaagcaat 1478
|||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||| ||
Sbjct: 1476 atgggcagaacaacgaagattggaggctctgaagttatattatagggttttggaagctat 1535
Query: 1479 gtgcacagcagaggctcagatattgcatgcaactaatttgacctctttattaactaatga 1538
||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1536 gtgcacagcagaggcccaaatattgcatgcaactaatttgacctccttattaactaatga 1595
Query: 1539 gaggtttcacagatgtatgcttgcatgttctgctgaactagttctggcaacgcataagac 1598
|||||| |||||||||||||| || ||||| |||||||||||||||||||| ||||||||
Sbjct: 1596 gaggttccacagatgtatgctggcgtgttcggctgaactagttctggcaacacataagac 1655
Query: 1599 tgtcacgatgctgtttcctgcagttttagagagaactggaatcacagcttttgatctcag 1658
|||||| ||||||||||| || ||| | ||| ||||||| || |||||||| ||||| ||
Sbjct: 1656 tgtcacaatgctgtttccagctgttctggagcgaactggcataacagctttcgatcttag 1715
Query: 1659 caaggtgatagagagtttcattagacacgaggagtccctccccagggagttgaggcggca 1718
||||||||||||||||||||||||||| |||||||| || || ||||||||||| |||||
Sbjct: 1716 caaggtgatagagagtttcattagacatgaggagtctctgccgagggagttgagacggca 1775
Query: 1719 tttgaattcattggaagaacgactcttggagagcatggtgtgggaaaagggctcctcaat 1778
|||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 1776 tttgaattcattggaagaacgacttttagagagcatggtctgggaaaagggctcctcaat 1835
Query: 1779 gtataattctttgacagttgcaagaccctctttatctgcagagataaatcgtcttgggct 1838
||||||||| || ||||||||||| || ||| | ||||||||||||||||||||||||||
Sbjct: 1836 gtataattcattaacagttgcaaggccttctctctctgcagagataaatcgtcttgggct 1895
Query: 1839 attagcagaaccaatgccatctttggatgcaattgctatgcatattaacttctcttctgt 1898
|||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct: 1896 attagcagaaccaatgccatctctggatgcaattgctgtgcatattaacttttcttctgg 1955
Query: 1899 cagcttgcctccattgccttctttacagaagcatgagttgtgtccaggccagaatggaga 1958
||||||||||| | ||||| | ||||||||| | | ||| || |||||||| ||
Sbjct: 1956 aggcttgcctccactatcttctgtgtcgaagcatgaaatatctcctggtcagaatgggga 2015
Query: 1959 tatccggtctccaaaaaggccatgcccagactatcgtagtgtgttagttgagcggaactc 2018
|||| ||||||||||||| |||||| ||||||| || ||||||||||| ||||| || ||
Sbjct: 2016 tatcaggtctccaaaaagaccatgcacagactaccggagtgtgttagtagagcgtaattc 2075
Query: 2019 ctttacttcaccagtgaaggatcgtctacttgctttcagtaaccttaaatcaaagctacc 2078
||| || |||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 2076 cttcacatcaccagtgaaggatcgtctacttgcattcactaaccttaaatcaaagctacc 2135
Query: 2079 acca---cctttgcagtctgcctttgccagtccaacacgtccaaaccccgggggaggagg 2135
|||| |||||||| ||||||||||| ||||| || || |||||||| |||||||||||
Sbjct: 2136 accacctcctttgcaatctgcctttgcaagtccgacgcgcccaaaccctgggggaggagg 2195
Query: 2136 ggaaacatgcgcggaaactgggattaatgtgttctttagcaag 2178
||||||||| || |||||||| |||||| | ||||||||||||
Sbjct: 2196 ggaaacatgtgcagaaactggaattaatatattctttagcaag 2238
Score = 71.9 bits (36), Expect = 2e-11
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 128 agcttttcaaagaaacaaaacatcttctgtcagcaaatatttcatctattgggaatggaa 187
|||||||||||| ||||||||||||||||| ||||| |||||| ||||||| |||||||
Sbjct: 146 agcttttcaaaggaacaaaacatcttctgttggcaaacatttcagctattggaaatggaa 205
>30131.m006948 conserved hypothetical protein
Length = 1839
Score = 63.9 bits (32), Expect = 4e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 1534 aatgagaggtttcacagatgtatgcttgcatgttctgctgaactagtt 1581
|||||||||||||| ||||| ||||||| ||||||||||||||||||
Sbjct: 499 aatgagaggtttcatagatgcctgcttgcttgttctgctgaactagtt 546