Jatropha Genome Database
- JcCA0073191.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0073191.10 - phase: 0
(1245 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m011013 UDP-glucuronate 5-epimerase, putative 147 2e-34
30174.m008860 UDP-glucuronate 5-epimerase, putative 92 1e-17
29629.m001442 UDP-glucuronate 5-epimerase, putative 82 9e-15
29783.m000322 UDP-glucuronate 5-epimerase, putative 82 9e-15
30146.m003476 UDP-glucuronate 5-epimerase, putative 58 1e-07
>30190.m011013 UDP-glucuronate 5-epimerase, putative
Length = 1314
Score = 147 bits (74), Expect = 2e-34
Identities = 245/302 (81%)
Strand = Plus / Plus
Query: 523 aatatcgctgggtttgtaagtttactcgaggtctgcaagtcagcaaatccccagcctgca 582
||||| ||||| ||||| | |||||| ||||| || || |||||||| || || ||||||
Sbjct: 586 aatattgctggctttgttaatttacttgaggtttgtaaatcagcaaacccacaacctgca 645
Query: 583 attgtttgggcgtcttccagttccgtctatggactcaatactaaagtacccttctcagaa 642
|||||||||| ||||| ||||| || |||||||| ||| || || ||||| |||||
Sbjct: 646 gttgtttgggcttcttcgagttcagtttatggactgaatttcaaggtgcccttttcagag 705
Query: 643 aaagatcgaacggatcggccatccagtctatatgctgctaccaagaaggctggtgaggaa 702
|| ||| |||| |||| ||| | ||| ||||||| ||||| ||||| ||||| ||||||
Sbjct: 706 aaggatagaactgatcagcctgcaagtttatatgcagctacgaagaaagctggagaggaa 765
Query: 703 attgcacacacttataatcatatctatggtttatcgatcactggtttgcggtttttcact 762
||||| || | ||||||||||| |||||||| || || |||||||| ||||||| |||
Sbjct: 766 attgctcattcgtataatcatatttatggtttgtcaattactggtttaaggttttttact 825
Query: 763 gtttatggtccttggggccgaccggatatggcttatttcttttttacgaaggatatattg 822
|||||||| |||||||| | || || ||||| ||||||||||| || |||||||| |||
Sbjct: 826 gtttatggaccttggggaaggcctgacatggcctatttctttttcactaaggatattttg 885
Query: 823 aa 824
||
Sbjct: 886 aa 887
>30174.m008860 UDP-glucuronate 5-epimerase, putative
Length = 459
Score = 91.7 bits (46), Expect = 1e-17
Identities = 256/326 (78%)
Strand = Plus / Plus
Query: 877 gattttacttatattgatgatatagtgaagggttgtttgggtgcgttagatactgcaaag 936
|||||||| || ||||||||||| || ||||||||||||||||| || |||||||| ||
Sbjct: 88 gattttacctacattgatgatattgtaaagggttgtttgggtgctttggatactgctgag 147
Query: 937 aagagtacaggaagtggtggggttaagaagggacctgcacaattgagagtgtttaacctt 996
|||||||| || ||||| ||| ||||| ||||| || |||||||| || || ||| |
Sbjct: 148 aagagtactggtagtggagggaagaagaaaggaccagctcaattgagggttttcaacttg 207
Query: 997 gggaatacttcgcctgttccggttagtaagcttgtgaatatattggagaagcttttgaag 1056
|| ||||| || ||||| || ||| | ||||| | ||| ||||| | ||||||||||
Sbjct: 208 ggaaatacatctcctgtgcctgtttcagatcttgtcagtattttggaaaggcttttgaag 267
Query: 1057 gtcaaggccaagaaagttgtgctgccgatgcctgcaaacggtgatgtgttgtttacccat 1116
||||| || |||| | | || | ||||| || || ||||| |||||| |||
Sbjct: 268 gtcaaagcaaagaggaatattatgaagctgcctaggaatggggatgttcagtttacacat 327
Query: 1117 gcgaatattagcttggcacagaaggagcttgggtataagcctacaacagatttgcaaacg 1176
|| |||||||| ||||| |||| ||| ||||||||||| || || ||||||||||| ||
Sbjct: 328 gctaatattagtttggcgcagatggaacttgggtataaacccactacagatttgcagaca 387
Query: 1177 gggttgaagaaatttgtgcggtggta 1202
|| ||||||||||||||||||||||
Sbjct: 388 ggcctgaagaaatttgtgcggtggta 413
>29629.m001442 UDP-glucuronate 5-epimerase, putative
Length = 1206
Score = 81.8 bits (41), Expect = 9e-15
Identities = 122/149 (81%)
Strand = Plus / Plus
Query: 577 cctgcaattgtttgggcgtcttccagttccgtctatggactcaatactaaagtacccttc 636
||||||||||| ||||| || || ||||| || ||||| || || ||| ||||||||||
Sbjct: 508 cctgcaattgtgtgggcttcgtcgagttctgtttatgggctgaacactgaagtacccttt 567
Query: 637 tcagaaaaagatcgaacggatcggccatccagtctatatgctgctaccaagaaggctggt 696
||||||| ||| |||| |||| |||| | || |||| || ||||| ||||| ||||||
Sbjct: 568 tcagaaatcgatagaacagatcagccagcaagcttatacgcagctacaaagaaagctggt 627
Query: 697 gaggaaattgcacacacttataatcatat 725
|| |||||||| ||||||||||| |||||
Sbjct: 628 gaagaaattgcgcacacttataaccatat 656
>29783.m000322 UDP-glucuronate 5-epimerase, putative
Length = 1302
Score = 81.8 bits (41), Expect = 9e-15
Identities = 103/121 (85%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 1084 atgcctgcaaacggtgatgtgttgtttacccatgcgaatattagcttggcacagaag-ga 1142
||||||| ||||||||| || |||||| ||||| |||||||| ||||| |||||| ||
Sbjct: 1141 atgcctggaaacggtgacgttccgtttactcatgctaatattagtttggc-cagaagaga 1199
Query: 1143 gcttgggtataagcctacaacagatttgcaaacggggttgaagaaatttgtgcggtggta 1202
||||||||||| || ||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 1200 acttgggtataaaccgacaaccgatttgcaaaccgggttgaagaagtttgttaggtggta 1259
Query: 1203 t 1203
|
Sbjct: 1260 t 1260
Score = 79.8 bits (40), Expect = 4e-14
Identities = 193/244 (79%)
Strand = Plus / Plus
Query: 568 aatccccagcctgcaattgtttgggcgtcttccagttccgtctatggactcaatactaaa 627
||||| ||||| || ||||||||||| || || ||||| |||||||| | ||| ||||
Sbjct: 625 aatcctcagccggctattgtttgggcttcgtcaagttctgtctatggcttaaatgataaa 684
Query: 628 gtacccttctcagaaaaagatcgaacggatcggccatccagtctatatgctgctaccaag 687
|| ||||| || ||| ||||| ||||| | ||| | ||| ||||||| ||||| ||
Sbjct: 685 gttcccttttctgaatctgatcggacggaccagcccgcgagtttatatgcggctacgaaa 744
Query: 688 aaggctggtgaggaaattgcacacacttataatcatatctatggtttatcgatcactggt 747
||||| ||||||||||| | || |||||||||||||| || ||| | || || |||||
Sbjct: 745 aaggcaggtgaggaaatcactcatacttataatcatatttacggtctgtcaattactggg 804
Query: 748 ttgcggtttttcactgtttatggtccttggggccgaccggatatggcttatttctttttt 807
||| | ||||| ||||| || ||||| ||||| |||| |||||||||||||||| |||
Sbjct: 805 ttgagattttttactgtctacggtccatggggtagacccgatatggcttatttctctttc 864
Query: 808 acga 811
||||
Sbjct: 865 acga 868
>30146.m003476 UDP-glucuronate 5-epimerase, putative
Length = 426
Score = 58.0 bits (29), Expect = 1e-07
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 535 tttgtaagtttactcgaggtctgcaagtcagcaaatccccagcctgcaattgtttgggcg 594
||||| |||||||| ||||| || || |||| ||| || || |||||||||||||||||
Sbjct: 211 tttgttagtttacttgaggtttgtaattcagtaaacccacaacctgcaattgtttgggct 270
Query: 595 tcttccagttccgtctatgga 615
||||| ||||| || ||||||
Sbjct: 271 tcttcgagttcagtttatgga 291
Score = 56.0 bits (28), Expect = 5e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 752 ggtttttcactgtttatggtccttggggccgaccggatatggcttatttcttttttacga 811
||||||| ||||||||||| |||||||| | || || ||||| ||||||||||| ||||
Sbjct: 355 ggttttttactgtttatggaccttggggaaggcctgacatggcctatttctttttcacga 414
Query: 812 agga 815
||||
Sbjct: 415 agga 418