Jatropha Genome Database

JcCA0072641.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0072641.10 + phase: 0 /partial
         (381 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29838.m001723 hypothetical protein                                    276   9e-74

>29838.m001723 hypothetical protein
          Length = 942

 Score =  276 bits (139), Expect = 9e-74
 Identities = 303/358 (84%), Gaps = 6/358 (1%)
 Strand = Plus / Plus

                                                                       
Query: 22  actttgagggatcttaccaaaggagggaagcagatctcttttgatcaaaatgagatggga 81
           ||||||||||||||||||||||| |||| |||  | ||||| |||||||||||| |||| 
Sbjct: 547 actttgagggatcttaccaaaggggggaggcatgtttctttcgatcaaaatgagctgggc 606

                                                                       
Query: 82  a------atattaagccttcaactttggaacgagaaaatccttatgctaaccgtgatgaa 135
           |      || |||||||||||||  |||||| |||||| ||||||| |||||  ||||||
Sbjct: 607 actcctgattttaagccttcaaccatggaacaagaaaacccttatgttaaccaggatgaa 666

                                                                       
Query: 136 gagggaagcccagaagagagcaagccaggaccattagattctgacaactctgtgagacca 195
           |||||||||||||||||||| || ||||  | |||||||||||| || ||| |||| |||
Sbjct: 667 gagggaagcccagaagagagtaaaccagtgctattagattctgagaattctatgaggcca 726

                                                                       
Query: 196 aatgaacaggagttacttgaaactgatgaaacgcctactaatcctttcccgatgcatttg 255
           ||||| ||||| || |||||||||||||| ||    ||| ||||||| || | |||| ||
Sbjct: 727 aatgatcaggatttgcttgaaactgatgacactgtcactgatcctttgcctacgcatgtg 786

                                                                       
Query: 256 gagaattcatcagtcaacataaatgatgaggacttacaggatactttggatgatctcggc 315
           |||||||||||||||||| || ||||||||||||| || || || |||||||  ||||| 
Sbjct: 787 gagaattcatcagtcaacctagatgatgaggacttccaagaaacattggatgggctcggg 846

                                                                     
Query: 316 aatgtttcaagttcagaatttgagatccctgggaattttgatgatcaggttgacattg 373
           ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 847 aatgtttcaggttcagaatttgagatccctggaaattttgatgatcaggttgacattg 904