Jatropha Genome Database
- JcCA0071981.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0071981.20 - phase: 2 /partial
(850 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29681.m001323 cdc6, putative 460 e-129
>29681.m001323 cdc6, putative
Length = 1572
Score = 460 bits (232), Expect = e-129
Identities = 361/404 (89%)
Strand = Plus / Plus
Query: 1 gctaataattgctgatgagttggattacttgatcactaaagaccgtgctgtccttcatga 60
||||||||| || ||||| ||||| || ||||| |||||||||||||| |||||||||||
Sbjct: 672 gctaataatagcagatgaattggactatttgattactaaagaccgtgccgtccttcatga 731
Query: 61 tcttttcatgcttacaactttcccattttctcgatgtatattgataggtgtagcaaatgc 120
|||||| ||||||||||||||||||||||||||||| ||||| |||||| ||||||||||
Sbjct: 732 tctttttatgcttacaactttcccattttctcgatgcatattaataggtatagcaaatgc 791
Query: 121 catagatttagctgatcgttttcttccaagacttcaatcattgaattgcaaacctatggt 180
||||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 792 catagatctagcagatcgttttcttccaagacttcaatcattgaactgcaagcctatggt 851
Query: 181 tgtgacttttagagcctattctaaggagcaaatcctcagaatacttcaggagagattgat 240
| ||||||||||| || || ||||| ||||| |||||||||||||| ||||| ||||
Sbjct: 852 cataacttttagagcttactccaaggaccaaattctcagaatacttcaagagaggctgat 911
Query: 241 ggcactgccttggaccacttttcacccaccagcattggagctctgcgccagaaaagttgc 300
|||||| ||||||||| |||||| |||| ||||||||||||||||||||||||||| ||
Sbjct: 912 ggcactatcttggaccatttttcatccacaagcattggagctctgcgccagaaaagtagc 971
Query: 301 agctgcctctggagacatgaggaaagctctgtgtgtttgcaggagtgcaattgagattct 360
|||||| || ||||||||| |||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 972 agctgcttcaggagacatgcggaaagctctttgtgtttgcaggagtgcggttgagatcct 1031
Query: 361 agaagcagaactgagagaatccacaggcaatctgaattcatttg 404
|||||||||||||| |||||| ||| ||||| ||||||||||||
Sbjct: 1032 agaagcagaactgaaagaatctacaagcaatatgaattcatttg 1075
Score = 317 bits (160), Expect = 6e-86
Identities = 295/340 (86%)
Strand = Plus / Plus
Query: 479 gtgaggattgatcacatggctgttgctttgtcaaaagcatatagatcacctatagtagac 538
|||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |||
Sbjct: 1108 gtgaggattgatcatatggctgttgctttgtcaaaagcatataggtcacctgtagtggac 1167
Query: 539 actattcaatctcttccgcagcatcaacaaataatactatgtgctgctgtgaagtttttt 598
|| |||||||||||||| |||||||||||| |||| ||||| |||||||||||||||||
Sbjct: 1168 accattcaatctcttcctcagcatcaacaagtaattctatgctctgctgtgaagtttttt 1227
Query: 599 cgaggaggaaagaaggacactattgttggagagctgaataaatattacatagacgtttgc 658
|| |||||||||||||| |||| | | |||||||||||||||| ||| |||| | |||
Sbjct: 1228 cggggaggaaagaaggatactactataggagagctgaataaatcttatgcagacatatgc 1287
Query: 659 aagtcaacaatgataccaccagttggaatttccgaatttttaagcatgtgcagagtatta 718
||||||||||||||||||||||||||| || || ||||| | ||||||| ||| ||
Sbjct: 1288 aagtcaacaatgataccaccagttggatttctggagtttttgaatatgtgcacagtgcta 1347
Query: 719 aatgaccagggacttctcaaactaggtcagtctcgagatgataaattaagaagactgatg 778
||||| ||||| || || ||||||||||| ||||| ||||||||||| |||||| ||| |
Sbjct: 1348 aatgatcagggcctcctaaaactaggtcaatctcgtgatgataaattgagaagagtgacg 1407
Query: 779 ctaaaagtagatgcagcagacattatttttgcattgcagg 818
| ||||||||||| |||||||||| ||||||||||||||
Sbjct: 1408 ttgaaagtagatgctgcagacattacttttgcattgcagg 1447