Jatropha Genome Database
- JcCA0071791.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0071791.10 - phase: 0 /pseudo
(1233 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30076.m004541 Protein CHMP7, putative 533 e-151
>30076.m004541 Protein CHMP7, putative
Length = 1317
Score = 533 bits (269), Expect = e-151
Identities = 494/569 (86%)
Strand = Plus / Plus
Query: 603 cctgcacttgatatggacaacagaaaagcttcagaaacaagttgatgtgatcgaccagcg 662
|||||||||||||||||| |||||||||||||| ||||| |||| || || ||||||||
Sbjct: 666 cctgcacttgatatggaccgcagaaaagcttcagcaacaaattgacgtcattgaccagcg 725
Query: 663 atatgaaatatcaagaaaattggcattagcatctctgaaatctggaaacaagaaaatggc 722
|||||| | |||||||| | |||||||| | |||||||||||||||||||||||||||
Sbjct: 726 ttatgaattgtcaagaaattcagcattagcttatctgaaatctggaaacaagaaaatggc 785
Query: 723 cctaaggcatgctagagagatgaagttggcctcagaaaatagagaaaaatgcacttcact 782
||||||||||||||| || |||||| |||||||||| | |||||||||||||||||| ||
Sbjct: 786 cctaaggcatgctagggatatgaagctggcctcagatagtagagaaaaatgcacttcgct 845
Query: 783 tttgaacagagtggatggagttcttaatattatcatgaatgctgaatctacaaagaaggt 842
||| ||| |||| || | ||||||||||||||| ||||||||||||||||||||||
Sbjct: 846 ttttaaccgagtagaggaagttcttaatattattgccgatgctgaatctacaaagaaggt 905
Query: 843 gaccgaggccatccaaattggagctcaagcaatgaagcaaaataagataactgtagagga 902
|| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 906 aactgaggccatccaaattggagctcaagcaatgaagcaaaataagataactgtggaaga 965
Query: 903 agttgatatctgtttggaagaactcgaggagagtattgattcacaaaagcaagttgaaaa 962
|||||| |||||||||||||||| ||||||| ||||||||||||||||||||| || ||
Sbjct: 966 ggttgatctctgtttggaagaacttgaggagaatattgattcacaaaagcaagtagagaa 1025
Query: 963 agctctggaatcaactccttcatacactggaattgaagatgaagatattgaagaagagtt 1022
|| |||||||||||||| |||||||||| || || |||||||||||||| ||||||||
Sbjct: 1026 ggcgctggaatcaactccatcatacactgttatcgaggatgaagatattgaggaagagtt 1085
Query: 1023 caagaaattagaggtggaaataggaagtgaaaaccttcagtctcatgttccaagaattgg 1082
|||||||||||| ||||| |||||| || | ||||||| |||| ||||||||||||||
Sbjct: 1086 taagaaattagagatggaagtaggaactgtagaccttcaatctccagttccaagaattgg 1145
Query: 1083 agtcagcagcatatcaggagaaagagacaattggggacccagtgactcattaagtggtgc 1142
| | ||||||| ||||||||||| ||| |||| || | | ||||||| |||||| |||
Sbjct: 1146 aatgagcagcacatcaggagaaacagataattcggtgtcgactgactcactaagtgatgc 1205
Query: 1143 cttttcaaatctcaagcttcaggatgctt 1171
|| |||||||| || |||||||||||||
Sbjct: 1206 tttgtcaaatcttaaacttcaggatgctt 1234
Score = 325 bits (164), Expect = 4e-88
Identities = 489/596 (82%), Gaps = 1/596 (0%)
Strand = Plus / Plus
Query: 1 atggactccagcgttgtgagggaattcataaagaaagaagttcctgattgggacgacgaa 60
||||| |||||| | |||| |||||||||| |||||||| |||||||| |||| |||
Sbjct: 1 atggattccagcatggtgatggaattcatatgcaaagaagtctctgattggaacgaggaa 60
Query: 61 gtgatcgcgacggcccgattcaaggcatttagtggccaaagatctgattgggaatccaaa 120
||||| || || ||| ||||||| ||||||||||| |||||||| ||||||||| | |||
Sbjct: 61 gtgatagccacagccagattcaaagcatttagtgggcaaagatcagattgggaacctaaa 120
Query: 121 tacctattctggagggatttgattctcaaagtcgctcgccatctgggccacttagccatt 180
|||| ||| |||||| |||||||||||||| | || || ||| |||||| ||| | |||
Sbjct: 121 taccaattttggaggaatttgattctcaaaattgcacggcatttgggcctcttcactatt 180
Query: 181 agaccttctcaggtaaagaatgagtggtttaatcgaggaggattgacccctttatgcctt 240
| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 181 cgtccttgtcaggtaaagaatgagtggtttaatcgaggaggattgacccctttatgtctt 240
Query: 241 gatcatgtcttgtttataatgtatagtgaaggtgatattatacgaagtgttgatcttgtg 300
|| ||||| ||||| ||||||| | |||||||||||||||||||| ||| ||| |||||
Sbjct: 241 gaccatgtactgtttctaatgtacactgaaggtgatattatacgaaatgtggatgttgtg 300
Query: 301 gatccaaggaatggaggactctcacagttttttaggaaagtgagaaatttggtggttaga 360
||| | | || ||| || |||| ||||| | ||| ||||| | ||| |||||| |||||
Sbjct: 301 gatgctacgagtgggcgattctctcagttatatagaaaagtaacaaacttggtgattaga 360
Query: 361 tcaaccacatcccctgaagtaatgctcgaagattgtgtcattcttacagttctgttgagg 420
|| |||||| |||| || || | || |||||| | ||||||||||| | |||| |
Sbjct: 361 tcgaccacaacccccgatctactactggaagataatctcattcttacaccattattgaag 420
Query: 421 gaaaaagctactgaag-taatcaagttttatctgaaagtcattggacatcttcatgcatt 479
||||||||| | ||| || | || |||||||||||| ||||||||| | ||||| ||
Sbjct: 421 gaaaaagctgatcaagttattaaacttttatctgaaaatcattggacgacatcatgtgtt 480
Query: 480 gttactatgacgaagtttcaggacatgtgtggaacaccaaatgaagcatctgcaattttg 539
|||||||||| |||||||||||||||||||||| ||||||||||||||||| | | |||
Sbjct: 481 gttactatgaggaagtttcaggacatgtgtggaggaccaaatgaagcatctgtagtcttg 540
Query: 540 agttatttatctggactcgggaaagcatgctatctctcggttcataagaaggaatt 595
||||| || |||||| | ||||||||| |||||||| ||| ||| ||||||||
Sbjct: 541 agttacttttctggagttgggaaagcacagtatctctctgtttgtaaaaaggaatt 596