Jatropha Genome Database
- JcCA0071361.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0071361.10 + phase: 0
(627 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29883.m001956 nucleic acid binding protein, putative 640 0.0
28694.m000662 nucleic acid binding protein, putative 276 2e-73
29794.m003304 nucleic acid binding protein, putative 192 2e-48
30170.m014220 nucleic acid binding protein, putative 184 4e-46
29780.m001361 zinc finger protein, putative 182 2e-45
29780.m001362 nucleic acid binding protein, putative 180 7e-45
29643.m000323 nucleic acid binding protein, putative 141 6e-33
29646.m001073 nucleic acid binding protein, putative 127 9e-29
30078.m002347 nucleic acid binding protein, putative 109 2e-23
29983.m003121 nucleic acid binding protein, putative 105 3e-22
30128.m008805 nucleic acid binding protein, putative 96 3e-19
29647.m001996 nucleic acid binding protein, putative 84 1e-15
29780.m001390 nucleic acid binding protein, putative 66 3e-10
30128.m008580 nucleic acid binding protein, putative 64 1e-09
28952.m000016 nucleic acid binding protein, putative 52 4e-06
>29883.m001956 nucleic acid binding protein, putative
Length = 1401
Score = 640 bits (323), Expect = 0.0
Identities = 501/561 (89%), Gaps = 12/561 (2%)
Strand = Plus / Plus
Query: 1 atgttccctgcagccatgtctaattcaacttctttgtctgaagaagctagtgtctcttct 60
|||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||
Sbjct: 1 atgttccctgcagccatgtccaattcaacttctttatctgaagatgctagtgtttcttct 60
Query: 61 ggtaacagagtagttcaagatttttgtggcataaatccagtggtt--aac---------- 108
|| || |||||||||||||||||||||||| |||||| | | ||| |||
Sbjct: 61 ggcaatagagtagttcaagatttttgtggcttaaatcaaattgtttcaactatttctcct 120
Query: 109 cagcaacaacaaggacagaaggtcaagaagaaaagaagccttccaggaaacccagaccca 168
|| || ||||| ||| ||| ||||||||||||||||||| || ||||| ||||||||
Sbjct: 121 caacagcaacagcaacaaaagatcaagaagaaaagaagcctaccgggaaatccagaccct 180
Query: 169 gatgcagaagtgatagcattatctccaaagactttattagctacaaatagattcgtatgt 228
||||| |||||| ||||||||||||||||||| || ||||||| |||||||| || |||
Sbjct: 181 gatgctgaagtggtagcattatctccaaagaccctactagctaccaatagatttgtgtgt 240
Query: 229 gagatctgtaacaaaggttttcaaagagatcagaatcttcaacttcacagaagaggacat 288
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagatctgtaacaaagggtttcaaagagatcagaatcttcaacttcacagaagaggacat 300
Query: 289 aaccttccatggaaactgaagcaaagaaacagcaaagaaataaaaaagagagcatatgtt 348
|| |||||||||||| |||||||||||||||||||||| || || |||||||| ||||||
Sbjct: 301 aatcttccatggaaattgaagcaaagaaacagcaaagagatcaagaagagagcttatgtt 360
Query: 349 tgtcctgaaccatcttgtgttcatcatcatccttctagagctcttggtgaccttacaggt 408
|||||||||||||| |||||||| |||||||| || |||||||| |||||||||||||||
Sbjct: 361 tgtcctgaaccatcatgtgttcaccatcatccctcaagagctctcggtgaccttacaggt 420
Query: 409 atcaagaaacactactgtagaaaacatggagaaaagaaatggaaatgtgaaaaatgttca 468
|||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 421 atcaagaaacactattgcagaaaacatggagaaaagaaatggaagtgtgaaaaatgctca 480
Query: 469 aagatctacgctgttcaatctgattggaaagctcattctaaaacttgtggaactagagag 528
|||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 481 aagatctatgctgttcaatctgattggaaggctcattctaaaacctgtggaactagagag 540
Query: 529 tatagatgtgactgtggaacc 549
|||||||||||||||||||||
Sbjct: 541 tatagatgtgactgtggaacc 561
>28694.m000662 nucleic acid binding protein, putative
Length = 1659
Score = 276 bits (139), Expect = 2e-73
Identities = 351/421 (83%), Gaps = 3/421 (0%)
Strand = Plus / Plus
Query: 132 caagaagaaaagaagccttccaggaaacccagacccagatgcagaagtgatagcattatc 191
||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 171 caagaagaagagaaacctaccaggaaacccagacccagatgcagaagtgatagctctatc 230
Query: 192 tccaaagactttattagctacaaatagattcgtatgtgagatctgtaacaaaggttttca 251
||||||||||| | || ||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 231 accaaagactttgatggcaacaaatagatttgtatgtgagatctgtaacaaagggtttca 290
Query: 252 aagagatcagaatcttcaacttcacagaagaggacataaccttccatggaaactgaagca 311
||||||||||||||||||||| || |||||||| ||||| || |||||||| || |||||
Sbjct: 291 aagagatcagaatcttcaactccatagaagagggcataatctgccatggaagctaaagca 350
Query: 312 aagaaacagcaaagaa---ataaaaaagagagcatatgtttgtcctgaaccatcttgtgt 368
||||| | ||| ||| |||| ||||| | ||||||||||| ||| | |||||
Sbjct: 351 aagaacaaacaaggaagtcataagaaagaaggtttatgtttgtccggaaactagctgtgt 410
Query: 369 tcatcatcatccttctagagctcttggtgaccttacaggtatcaagaaacactactgtag 428
||||||| | || || || || ||||||||||| ||||| ||||| ||||||| | ||
Sbjct: 411 tcatcatgacccatcgagggcacttggtgacctgacaggaatcaaaaaacactttagcag 470
Query: 429 aaaacatggagaaaagaaatggaaatgtgaaaaatgttcaaagatctacgctgttcaatc 488
||| ||||| || ||||| ||||||||||| || || ||||| | || || ||||||||
Sbjct: 471 aaagcatggcgagaagaagtggaaatgtgataagtgctcaaaaaggtatgcagttcaatc 530
Query: 489 tgattggaaagctcattctaaaacttgtggaactagagagtatagatgtgactgtggaac 548
||||||||||||||||| || || ||||| ||||| || || |||||||||||||||||
Sbjct: 531 agattggaaagctcattccaagacctgtggcactagggaatacagatgtgactgtggaac 590
Query: 549 c 549
|
Sbjct: 591 c 591
>29794.m003304 nucleic acid binding protein, putative
Length = 1341
Score = 192 bits (97), Expect = 2e-48
Identities = 316/389 (81%)
Strand = Plus / Plus
Query: 161 cagacccagatgcagaagtgatagcattatctccaaagactttattagctacaaatagat 220
||||||||||||||||||||||||| |||||||| || ||| || | || || || | |
Sbjct: 14 cagacccagatgcagaagtgatagctttatctcccaaaactctaatggcgaccaaccgct 73
Query: 221 tcgtatgtgagatctgtaacaaaggttttcaaagagatcagaatcttcaacttcacagaa 280
| |||||||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||
Sbjct: 74 ttatatgtgagatctgtaacaaaggatttcagagagatcagaatcttcagcttcatagaa 133
Query: 281 gaggacataaccttccatggaaactgaagcaaagaaacagcaaagaaataaaaaagagag 340
|||| || || ||||| ||||| | |||||||||| | ||||||| | | ||||| |
Sbjct: 134 gagggcacaatcttccgtggaagttaaagcaaagaacaaacaaagaagtgagaaagaagg 193
Query: 341 catatgtttgtcctgaaccatcttgtgttcatcatcatccttctagagctcttggtgacc 400
|||||| ||||| ||| | | || || || ||| |||| || || || || |||||||
Sbjct: 194 tatatgtatgtccagaaactacatgcgtgcaccatgatccatcaagggcactcggtgacc 253
Query: 401 ttacaggtatcaagaaacactactgtagaaaacatggagaaaagaaatggaaatgtgaaa 460
||||||| |||||||| |||| || ||||| ||||| || ||||| |||||||||||||
Sbjct: 254 ttacaggaatcaagaagcacttttgcagaaagcatggtgagaagaagtggaaatgtgaaa 313
Query: 461 aatgttcaaagatctacgctgttcaatctgattggaaagctcattctaaaacttgtggaa 520
| || ||||| || ||||||||||| |||||||||||||| || || | ||| || |
Sbjct: 314 agtgctcaaaacgttatgctgttcaatcagattggaaagctcactccaagatttgcggca 373
Query: 521 ctagagagtatagatgtgactgtggaacc 549
| ||||||||||||||||| |||||||||
Sbjct: 374 caagagagtatagatgtgattgtggaacc 402
>30170.m014220 nucleic acid binding protein, putative
Length = 1509
Score = 184 bits (93), Expect = 4e-46
Identities = 333/413 (80%)
Strand = Plus / Plus
Query: 133 aagaagaaaagaagccttccaggaaacccagacccagatgcagaagtgatagcattatct 192
|||||||| |||| |||||| |||| ||||| |||||||| |||||||| || |||||
Sbjct: 115 aagaagaagagaaaccttcctggaatgccagatccagatgctgaagtgattgctttatca 174
Query: 193 ccaaagactttattagctacaaatagattcgtatgtgagatctgtaacaaaggttttcaa 252
||||| || | ||||| || || || ||||| ||||||||||| |||||||| ||||||
Sbjct: 175 ccaaaaacactgttagccacgaacaggttcgtgtgtgagatctgcaacaaaggctttcaa 234
Query: 253 agagatcagaatcttcaacttcacagaagaggacataaccttccatggaaactgaagcaa 312
| || ||||| || || |||||| | |||| |||||| | ||||||||||| |||||
Sbjct: 235 cgggaccagaacctccagcttcaccgtcgaggtcataacttaccatggaaactaaagcag 294
Query: 313 agaaacagcaaagaaataaaaaagagagcatatgtttgtcctgaaccatcttgtgttcat 372
||| || ||||| || |||||||| || ||||| || ||| ||||||||||||||
Sbjct: 295 cgaactagtaaagagccaataaagagagtctacgtttgcccagaagcatcttgtgttcat 354
Query: 373 catcatccttctagagctcttggtgaccttacaggtatcaagaaacactactgtagaaaa 432
||| |||| |||||||||| |||||| | || || ||||||||||||| ||| |||||
Sbjct: 355 cataatccagctagagctctcggtgacttgactggcatcaagaaacacttctgcagaaag 414
Query: 433 catggagaaaagaaatggaaatgtgaaaaatgttcaaagatctacgctgttcaatctgat 492
|||||||||||||||||||| ||||||| || ||||||| || || || || || |||
Sbjct: 415 catggagaaaagaaatggaagtgtgaaaggtgctcaaagaaatatgcagtacagtcagat 474
Query: 493 tggaaagctcattctaaaacttgtggaactagagagtatagatgtgactgtgg 545
|||||||| || || |||||||| ||||||||||||| |||||| |||||
Sbjct: 475 tggaaagcccacatgaagacttgtggcactagagagtataaatgtgattgtgg 527
>29780.m001361 zinc finger protein, putative
Length = 1716
Score = 182 bits (92), Expect = 2e-45
Identities = 146/164 (89%)
Strand = Plus / Plus
Query: 382 tctagagctcttggtgaccttacaggtatcaagaaacactactgtagaaaacatggagaa 441
||||| ||||| ||||||||||| || |||||||||||||| | ||||||||||| ||
Sbjct: 400 tctagggctctcggtgaccttactggcatcaagaaacactattcaagaaaacatggtgag 459
Query: 442 aagaaatggaaatgtgaaaaatgttcaaagatctacgctgttcaatctgattggaaagct 501
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 460 aagaaatggaagtgtgagaaatgttcaaagaggtacgctgttcaatctgattggaaagcc 519
Query: 502 cattctaaaacttgtggaactagagagtatagatgtgactgtgg 545
|||||||| |||||||| ||| ||||||| ||||||||||||||
Sbjct: 520 cattctaagacttgtggcactcgagagtacagatgtgactgtgg 563
>29780.m001362 nucleic acid binding protein, putative
Length = 1770
Score = 180 bits (91), Expect = 7e-45
Identities = 148/167 (88%)
Strand = Plus / Plus
Query: 379 ccttctagagctcttggtgaccttacaggtatcaagaaacactactgtagaaaacatgga 438
|||||||| ||||||||||| ||||| |||||||||||||| || | ||||||||||||
Sbjct: 373 ccttctagggctcttggtgatcttactggtatcaagaaacattattctagaaaacatggt 432
Query: 439 gaaaagaaatggaaatgtgaaaaatgttcaaagatctacgctgttcaatctgattggaaa 498
|||||||||||||| ||||| ||||| || ||| || |||||||||||||||||||||
Sbjct: 433 gaaaagaaatggaagtgtgagaaatgctctaagcgttatgctgttcaatctgattggaaa 492
Query: 499 gctcattctaaaacttgtggaactagagagtatagatgtgactgtgg 545
|||||||||||||||||||| ||| |||| || ||||||||||||||
Sbjct: 493 gctcattctaaaacttgtggcactcgagaatacagatgtgactgtgg 539
>29643.m000323 nucleic acid binding protein, putative
Length = 1632
Score = 141 bits (71), Expect = 6e-33
Identities = 269/335 (80%)
Strand = Plus / Plus
Query: 211 acaaatagattcgtatgtgagatctgtaacaaaggttttcaaagagatcagaatcttcaa 270
||||| |||||| | || || ||||| ||||| |||||||||||||| || || ||||||
Sbjct: 181 acaaacagattcctttgcgaaatctgcaacaagggttttcaaagagaccaaaaccttcaa 240
Query: 271 cttcacagaagaggacataaccttccatggaaactgaagcaaagaaacagcaaagaaata 330
|| || ||||||||||| || ||||||||||| ||||||| ||| | ||||| |
Sbjct: 241 ctccatagaagaggacacaatcttccatggaagttgaagcagagatcgactaaagaggtt 300
Query: 331 aaaaagagagcatatgtttgtcctgaaccatcttgtgttcatcatcatccttctagagct 390
||||||| || |||| | || |||||| ||||| || ||| |||| || ||||||
Sbjct: 301 aaaaagaaagtatatatctgccctgaaaagagctgtgtacaccatgatccatcaagagct 360
Query: 391 cttggtgaccttacaggtatcaagaaacactactgtagaaaacatggagaaaagaaatgg 450
| |||||||| ||||| || ||||| || | | |||||||||||||||||||| |||
Sbjct: 361 ttaggtgacctgacaggaataaagaagcattttagcagaaaacatggagaaaagaagtgg 420
Query: 451 aaatgtgaaaaatgttcaaagatctacgctgttcaatctgattggaaagctcattctaaa 510
|| ||||| ||||||||||||| || || |||||||| ||||||||||||||| |||
Sbjct: 421 aagtgtgagaaatgttcaaagaaatatgcagttcaatcagattggaaagctcatagtaag 480
Query: 511 acttgtggaactagagagtatagatgtgactgtgg 545
| |||||||| |||||||||||||||||||||||
Sbjct: 481 atctgtggaaccagagagtatagatgtgactgtgg 515
>29646.m001073 nucleic acid binding protein, putative
Length = 1563
Score = 127 bits (64), Expect = 9e-29
Identities = 148/176 (84%)
Strand = Plus / Plus
Query: 334 aagagagcatatgtttgtcctgaaccatcttgtgttcatcatcatccttctagagctctt 393
||||||| ||||| |||||||||||| |||||||||||||| |||| || ||||| |
Sbjct: 295 aagagagtttatgtgtgtcctgaaccaacttgtgttcatcatgatccgtcgagagcatta 354
Query: 394 ggtgaccttacaggtatcaagaaacactactgtagaaaacatggagaaaagaaatggaaa 453
||||| ||||| || || ||||| || | ||| || ||||||||||| ||||| ||||||
Sbjct: 355 ggtgatcttactggaataaagaagcatttctgcaggaaacatggagagaagaagtggaaa 414
Query: 454 tgtgaaaaatgttcaaagatctacgctgttcaatctgattggaaagctcattctaa 509
||||| |||||||| |||| || |||||||| ||||||||||||||||| |||||
Sbjct: 415 tgtgataaatgttctaagaaatatgctgttcagtctgattggaaagctcactctaa 470
>30078.m002347 nucleic acid binding protein, putative
Length = 1578
Score = 109 bits (55), Expect = 2e-23
Identities = 103/119 (86%)
Strand = Plus / Plus
Query: 430 aaacatggagaaaagaaatggaaatgtgaaaaatgttcaaagatctacgctgttcaatct 489
||||||||||| || |||||||| ||||| ||||||||||||| || || ||||||||
Sbjct: 418 aaacatggagagaaaaaatggaagtgtgagaaatgttcaaagaaatatgcagttcaatca 477
Query: 490 gattggaaagctcattctaaaacttgtggaactagagagtatagatgtgactgtggaac 548
|| ||||||||||| || || |||||||| |||||||| |||| |||||||||||||||
Sbjct: 478 gactggaaagctcactccaagacttgtggcactagagaatataaatgtgactgtggaac 536
>29983.m003121 nucleic acid binding protein, putative
Length = 1314
Score = 105 bits (53), Expect = 3e-22
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 364 tgtgttcatcatcatccttctagagctcttggtgaccttacaggtatcaagaaacactac 423
||||| ||||| ||||||||||||||||| || ||||| || || || ||||| ||||
Sbjct: 160 tgtgtccatcaccatccttctagagctctcggagacctaactggaataaagaagcacttt 219
Query: 424 tgtagaaaacatggagaaaagaaatggaaatgtgaaaaatgttcaaagatctacgctgtt 483
|| ||||| ||||| || ||||||||||| || || ||||||||||||| || || ||
Sbjct: 220 tgcagaaagcatggtgagaagaaatggaagtgcgagaaatgttcaaagagatatgccgtg 279
Query: 484 caatctgattggaaagctcattctaaaacttgtggaactagagagtatagatgtgactgt 543
|| || ||||||||||| || || ||||| ||||| ||||||||||| | ||| ||||||
Sbjct: 280 cagtcagattggaaagcacactccaaaacctgtgggactagagagtacaaatgcgactgt 339
Query: 544 ggaac 548
|||||
Sbjct: 340 ggaac 344
>30128.m008805 nucleic acid binding protein, putative
Length = 1542
Score = 95.6 bits (48), Expect = 3e-19
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 400 cttacaggtatcaagaaacactactgtagaaaacatggagaaaagaaatggaaatgtgaa 459
||||||||||||||||| || | || |||||||||| ||||||||||||||||||||
Sbjct: 472 cttacaggtatcaagaagcattttagtcgaaaacatggtgaaaagaaatggaaatgtgat 531
Query: 460 aaatgttcaaagatctacgctgttcaatctgattggaaagctca 503
||||| ||||||| || || || ||||||||||||||||||||
Sbjct: 532 aaatgctcaaagaaatatgcagtacaatctgattggaaagctca 575
>29647.m001996 nucleic acid binding protein, putative
Length = 1896
Score = 83.8 bits (42), Expect = 1e-15
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 223 gtatgtgagatctgtaacaaaggttttcaaagagatcagaatcttcaacttcacagaaga 282
|||||||| || || |||||||| |||||||| ||||| ||||| ||||| || ||||||
Sbjct: 343 gtatgtgaaatatgcaacaaagggtttcaaagggatcaaaatctacaactgcatagaaga 402
Query: 283 ggacataaccttccatggaaactgaagcaaagaa 316
|| ||||||||||||||||| || | ||||||||
Sbjct: 403 ggccataaccttccatggaagctaaggcaaagaa 436
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 427 agaaaacatggagaaaagaaatggaaatgtgaaaaatgttcaaagatctacgctgttcaa 486
||||||||||| || ||||||||||||||||| || || || |||| || || ||||||
Sbjct: 547 agaaaacatggtgagaagaaatggaaatgtgataagtgctccaagaaatatgcagttcaa 606
Query: 487 tctgattggaaagctcat 504
||||||||||||||||||
Sbjct: 607 tctgattggaaagctcat 624
>29780.m001390 nucleic acid binding protein, putative
Length = 1434
Score = 65.9 bits (33), Expect = 3e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 215 atagattcgtatgtgagatctgtaacaaaggttttcaaagagatcagaa 263
|||||| ||||||||||||||||||| |||| ||||||||||| |||||
Sbjct: 203 atagatacgtatgtgagatctgtaaccaagggtttcaaagagaccagaa 251
>30128.m008580 nucleic acid binding protein, putative
Length = 1362
Score = 63.9 bits (32), Expect = 1e-09
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 386 gagctcttggtgaccttacaggtatcaagaaacactactgtagaaaacatggagaaaaga 445
||||||| |||||| | ||||| || || || || | ||| |||||||||||||||||||
Sbjct: 323 gagctctaggtgacttgacaggcataaaaaagcatttctgcagaaaacatggagaaaaga 382
Query: 446 aatggaaatgtgaaaaatgttcaaagatctacgctgttcaatctgattggaa 497
||||||| || || ||||| |||||| || ||||||||||| || |||||
Sbjct: 383 aatggaagtgcgacaaatgctcaaagtgttatgctgttcaatcagactggaa 434
Score = 52.0 bits (26), Expect = 4e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 253 agagatcagaatcttcaacttcacagaagaggacataaccttccatggaaactgaagcaa 312
||||||||||||||||| || ||||| ||||| || ||| | || |||||||| ||||||
Sbjct: 190 agagatcagaatcttcagctccacaggagaggtcacaacttgccctggaaacttaagcaa 249
Query: 313 ag 314
||
Sbjct: 250 ag 251
>28952.m000016 nucleic acid binding protein, putative
Length = 1329
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 223 gtatgtgagatctgtaacaaaggttttcaaagagatca 260
|||||||||||||| ||| |||| ||||||||||||||
Sbjct: 169 gtatgtgagatctgcaaccaagggtttcaaagagatca 206