Jatropha Genome Database
- JcCA0070381.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0070381.20 - phase: 0
(570 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014300 conserved hypothetical protein 135 3e-31
30170.m014296 conserved hypothetical protein 60 2e-08
30170.m014297 conserved hypothetical protein 54 9e-07
>30170.m014300 conserved hypothetical protein
Length = 1209
Score = 135 bits (68), Expect = 3e-31
Identities = 283/354 (79%), Gaps = 3/354 (0%)
Strand = Plus / Plus
Query: 10 tgggctcaacttccaccggaatttcttcaagtgattgccgagaaacataccaactatgtt 69
|||||| |||| ||||||||| | || ||||| ||||| || ||||||||||| || |||
Sbjct: 13 tgggctgaactaccaccggaactgctccaagtaattgcagataaacataccaattacgtt 72
Query: 70 gattattacgtttgcactcgagctgtctgcaaatcttggtacgcagctatacagaagaga 129
|||||| ||| ||||||||||| ||| ||| ||| | |||||||| || |||
Sbjct: 73 gattatcttgtt---actcgagctgtttgcggatcatggcaatcagctatagcaaaaaga 129
Query: 130 cccaacaacaatcttctttgccaactcccatttctattgcttcctaaccatctaaacaaa 189
||| | || ||||||| || ||||| |||||||| ||||||||| | | | ||||||
Sbjct: 130 ccccataatcatcttctctgtcaacttccatttcttttgcttccttattaccaaaacaat 189
Query: 190 ccagaccaccgtggattctacagcatgtcaaacgacaaaacgtatcgtcttgaattgcct 249
||||| | || |||||||||| ||| || |||| |||| ||| ||||||||||||
Sbjct: 190 ccagatcgtcgcggattctacaacatctctgacgataaaatatatgtccttgaattgcct 249
Query: 250 gaagcttttgaaaagcgctgttgtggatcatcccatggctggttaattatggttgaagaa 309
||||||| ||||||||| || || ||||| |||||||| ||| ||||||||||||||||
Sbjct: 250 gaagcttatgaaaagcgttgctgcggatcgtcccatggttggctaattatggttgaagac 309
Query: 310 accccaactatttttctcttaaatcctttaacaagaaccagaattgagcttcct 363
| |||| | || |||||||||||||| ||||||||| |||||||||||||||
Sbjct: 310 agcccatcaatctttctcttaaatcccttaacaagagaaagaattgagcttcct 363
>30170.m014296 conserved hypothetical protein
Length = 1221
Score = 60.0 bits (30), Expect = 2e-08
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 241 gaattgcctgaagcttttgaaaagcgctgttgtggatcatcccatggctggttaattatg 300
||||||||||| | ||||||| || |||||||| || || ||||| |||||| |||||
Sbjct: 235 gaattgcctgagaccattgaaaaacgttgttgtggttcttctcatggttggttagttatg 294
Query: 301 gttgaagaaaccccaactatttttctcttaaatcctttaacaagaaccagaattgagctt 360
|| ||||| || || | |||||||| |||||||| ||||| | | | ||||||||||||
Sbjct: 295 gtcgaagatactccgtcaatttttctattaaatccgttaactaaagctagaattgagctt 354
Query: 361 cc 362
||
Sbjct: 355 cc 356
>30170.m014297 conserved hypothetical protein
Length = 1221
Score = 54.0 bits (27), Expect = 9e-07
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 268 tgttgtggatcatcccatggctggttaattatggttgaagaaaccccaactatttttctc 327
|||||||| || || ||||| |||||| ||||||| ||||| || || | || ||||||
Sbjct: 262 tgttgtggttcttctcatggttggttagttatggtcgaagatactccgtcaatatttctc 321
Query: 328 ttaaatcctttaacaagaaccagaattgagcttcc 362
|||||||| || || | | ||||||||||||||||
Sbjct: 322 ttaaatccattgactaaatccagaattgagcttcc 356