Jatropha Genome Database
- JcCA0066941.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0066941.10 + phase: 0 /partial
(567 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28153.m000279 conserved hypothetical protein 593 e-169
29726.m003904 conserved hypothetical protein 228 3e-59
>28153.m000279 conserved hypothetical protein
Length = 1434
Score = 593 bits (299), Expect = e-169
Identities = 500/567 (88%)
Strand = Plus / Plus
Query: 1 tctctaggccttgtggagctcgaaattctacagagaagcggctcctccactgagaagaag 60
||||| || ||||| ||||| |||||| |||| ||||| ||||||| |||||||| ||
Sbjct: 175 tctcttggacttgttgagcttgaaattttacaaagaagtggctcctttactgagaaaaaa 234
Query: 61 caagctgctgttataataccagtggttcagaagcaacaccaacttcttgtaactctgctt 120
||||||||| ||| ||||||||||||| |||||||| || |||||||||||| |||||
Sbjct: 235 caagctgctactattttaccagtggttcaaaagcaacatcagcttcttgtaactttgctt 294
Query: 121 ctctgtaatgcttgtgctatggaggcccttcctatatgccttgataaaatctttcatcct 180
| |||||||||||||| |||||||| || ||||||| |||||||||||| || |||||
Sbjct: 295 ttatgtaatgcttgtgcaatggaggcactgcctatataccttgataaaattttccatccc 354
Query: 181 tttgttgctgttctgctatctgttacttttgtccttgcttttggggaggtaattccacaa 240
|||||||||||| | | |||||||||||||| ||||||||||||||| | ||||| |||
Sbjct: 355 tttgttgctgttgttttgtctgttacttttgttcttgcttttggggagatcattccgcaa 414
Query: 241 gcaatttgttcgagatatggactgtttgttggtgccaatttcgtttggctagtgcgtatt 300
|| || ||||| ||||||||||| | ||||||||||||||| || ||| ||||||| |||
Sbjct: 415 gctatatgttcaagatatggactctatgttggtgccaatttggtatggttagtgcgaatt 474
Query: 301 ttgatgatcatctgctatcccattgcttatccgatagggaagattctggatgctgcacta 360
|||||| ||||||||||||||||||| ||||| || |||||| || ||||||||||| |
Sbjct: 475 ttgatgttcatctgctatcccattgcctatccaattgggaaggttttggatgctgcattg 534
Query: 361 ggacacagtgatgctttgtttagacgagctcagcttaaagcacttgtctctatccatggc 420
|| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gggcacgatgatgctctgtttagacgagctcagcttaaagcacttgtctctatccatggc 594
Query: 421 caagaggctggcaaggggggtgaactcacacacgatgaaacaacaattatcagcggagca 480
|| |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||
Sbjct: 595 caggaggctggcaagggtggtgaactcacacatgacgaaacaacaattatcagcggagca 654
Query: 481 ctagatctaactgaaaagactgcggaggaggctatgacacctattgaatccacattttct 540
||||||||||| ||||||||||| || ||||||||||||||||| ||||| || ||||||
Sbjct: 655 ctagatctaaccgaaaagactgccgaagaggctatgacacctatagaatcgaccttttct 714
Query: 541 ttagatgtcaattcaaaattggactgg 567
|||||||||||||||||||||||||||
Sbjct: 715 ttagatgtcaattcaaaattggactgg 741
>29726.m003904 conserved hypothetical protein
Length = 1509
Score = 228 bits (115), Expect = 3e-59
Identities = 442/551 (80%)
Strand = Plus / Plus
Query: 1 tctctaggccttgtggagctcgaaattctacagagaagcggctcctccactgagaagaag 60
||||| || ||||| |||||||||||||| || | ||||| |||| | ||||||||
Sbjct: 175 tctctcggtcttgttgagctcgaaattcttcaacgcagcggtacctctagcgagaagaaa 234
Query: 61 caagctgctgttataataccagtggttcagaagcaacaccaacttcttgtaactctgctt 120
|||||||||| ||| | || |||||||| ||||| || |||||| | || || |||||
Sbjct: 235 caagctgctgctattcttccggtggttcaaaagcagcatcaacttttagtgacgttgctt 294
Query: 121 ctctgtaatgcttgtgctatggaggcccttcctatatgccttgataaaatctttcatcct 180
| ||||||||| |||||||||||| |||||||||| ||||||||| | || |||
Sbjct: 295 ttatgtaatgctgctgctatggaggctcttcctatataccttgataagcttttcaatcag 354
Query: 181 tttgttgctgttctgctatctgttacttttgtccttgcttttggggaggtaattccacaa 240
| ||||||| | | |||||||| || ||||| || |||||||||||| |||||||||
Sbjct: 355 tatgttgctataatactatctgtcacatttgttctattttttggggaggttattccacaa 414
Query: 241 gcaatttgttcgagatatggactgtttgttggtgccaatttcgtttggctagtgcgtatt 300
|||| || || ||||||||||| ||||||||||||||| || ||||| || || |||
Sbjct: 415 tcaatatgctccagatatggacttgctgttggtgccaattttgtatggcttgtacgaatt 474
Query: 301 ttgatgatcatctgctatcccattgcttatccgatagggaagattctggatgctgcacta 360
||||||| || |||||||| || | ||||| || ||||||||||||||| | |||
Sbjct: 475 ctgatgattatttgctatccaatatcatatcccattgggaagattctggattgggtactg 534
Query: 361 ggacacagtgatgctttgtttagacgagctcagcttaaagcacttgtctctatccatggc 420
|| || | ||| || || || || || |||||| | |||| ||||| || |||||| |
Sbjct: 535 gggcataatgaagcattattcaggcgggctcagttaaaagttcttgtttcaatccatagt 594
Query: 421 caagaggctggcaaggggggtgaactcacacacgatgaaacaacaattatcagcggagca 480
|| |||||||| ||||| |||||||||||||||||||| ||||||||||| || |||||
Sbjct: 595 caggaggctggaaagggaggtgaactcacacacgatgagacaacaattattagtggagcg 654
Query: 481 ctagatctaactgaaaagactgcggaggaggctatgacacctattgaatccacattttct 540
|| || |||||||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct: 655 cttgacttaactgaaaagactgctgaagaggctatgacacctattgaatcaaccttttca 714
Query: 541 ttagatgtcaa 551
|||||||||||
Sbjct: 715 ttagatgtcaa 725