Jatropha Genome Database

JcCA0066751.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0066751.10 + phase: 0 /pseudo/partial
         (567 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29661.m000908 zinc finger protein, putative                           117   7e-26

>29661.m000908 zinc finger protein, putative
          Length = 621

 Score =  117 bits (59), Expect = 7e-26
 Identities = 83/91 (91%)
 Strand = Plus / Plus

                                                                       
Query: 354 taagactcatgagtgctccatctgccacagaacttttccttccggacaggccctgggtgg 413
           ||||||||  ||||| |||||||||||| |||||||||| |||||||||||  |||||||
Sbjct: 378 taagactcgagagtgttccatctgccaccgaacttttccctccggacaggctttgggtgg 437

                                          
Query: 414 acacaagcggcgccactatgatggtggcagt 444
           |||||||||||| ||||||||||||||||||
Sbjct: 438 acacaagcggcggcactatgatggtggcagt 468



 Score = 77.8 bits (39), Expect = 6e-14
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 76  aattcgcctactgaagaagaatacttggctctttgccttcttatgcttgctaaaggcacc 135
           ||||| ||||| |||||||||||||| |||||||||||||| ||||| ||||||| ||||
Sbjct: 118 aattcacctaccgaagaagaatacttagctctttgccttctcatgctcgctaaagacacc 177

              
Query: 136 acc 138
           |||
Sbjct: 178 acc 180