Jatropha Genome Database

JcCA0066671.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0066671.10 - phase: 2 /partial
         (235 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29684.m000326 conserved hypothetical protein                          311   1e-84
30000.m000374 conserved hypothetical protein                          289   4e-78

>29684.m000326 conserved hypothetical protein
          Length = 1203

 Score =  311 bits (157), Expect = 1e-84
 Identities = 181/189 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   attttttaattctcatgatcgagaatttcatgtagcatctcttccatataagcctgattt 60
           ||||||||| |||||||| | |||||||||||||||||| ||||| || |||||||||||
Sbjct: 795 attttttaaatctcatgaccaagaatttcatgtagcatcccttccttacaagcctgattt 854

                                                                       
Query: 61  caaggttatgccagagggttgggatggtaccatcaaagacctggatgaagtccactatga 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 caaggtgatgccagagggttgggatggtaccatcaaagacctggatgaagtccactatga 914

                                                                       
Query: 121 gatatccatgaaagaggatgaaatgctgtatcaagaatttgtccaaaagatgaacttcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 915 gatatccatgaaagaggatgaaatgctgtatcaagaatttgtccagaagatgaacttcaa 974

                    
Query: 181 caaaatgaa 189
           |||||||||
Sbjct: 975 caaaatgaa 983


>30000.m000374 conserved hypothetical protein
          Length = 1095

 Score =  289 bits (146), Expect = 4e-78
 Identities = 182/194 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   attttttaattctcatgatcgagaatttcatgtagcatctcttccatataagcctgattt 60
           |||||||||||||||||||| |||||||||| ||||||| ||||| || |||||||||||
Sbjct: 795 attttttaattctcatgatcaagaatttcatatagcatcccttccttacaagcctgattt 854

                                                                       
Query: 61  caaggttatgccagagggttgggatggtaccatcaaagacctggatgaagtccactatga 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 caaggtgatgccagagggttgggatggtaccatcaaagacctggatgaagtccactatga 914

                                                                       
Query: 121 gatatccatgaaagaggatgaaatgctgtatcaagaatttgtccaaaagatgaacttcaa 180
           ||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||||
Sbjct: 915 gatatccatgaaagaggatgacatgctgtatgaagaattcgtccagaagatgaacttcaa 974

                         
Query: 181 caaaatgaaagtaa 194
            |||||||| ||||
Sbjct: 975 taaaatgaaggtaa 988