Jatropha Genome Database
- JcCA0066651.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0066651.20 + phase: 0 /pseudo
(1106 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29805.m001487 DNA replication licensing factor MCM8, putative 1051 0.0
>29805.m001487 DNA replication licensing factor MCM8, putative
Length = 2274
Score = 1051 bits (530), Expect = 0.0
Identities = 918/1046 (87%), Gaps = 1/1046 (0%)
Strand = Plus / Plus
Query: 61 gcaagcaacagtatggaaatcctggccgtttattttccgacgaatgatttctccgttgac 120
||||||||||||| ||| |||||||||| |||||| ||| |||| ||| | | || |||
Sbjct: 61 gcaagcaacagtacggatatcctggccgcttatttcccgtcgaacgatatgacagtcgac 120
Query: 121 gaggacaagctgatgctgatatctgatctcatccacttcttctccacatctctaggacaa 180
|||||||||||||| || |||||| | |||||| | |||||||||||||||| || |||
Sbjct: 121 gaggacaagctgattctcatatctaaactcatcaatttcttctccacatctcgtggtcaa 180
Query: 181 gatctcgcttctcaggtgaaggaagagaatggcgccttctttttgccgattgactttgaa 240
|| |||||||||||||| || ||||||||||| || || ||||| || ||||||||| ||
Sbjct: 181 gacctcgcttctcaggtaaaagaagagaatggtgcattatttttaccaattgactttcaa 240
Query: 241 caatttcgaaaaatatgtgatgttgaggaattttatgtgattttagaagagaagcctaaa 300
|||||||||||||||||||| ||||| || ||||||| |||||||||||||||||||||
Sbjct: 241 caatttcgaaaaatatgtgacgttgatgagttttatgcaattttagaagagaagcctaaa 300
Query: 301 gtagctctctcttgcctgggcgctgcagttcacaaggtgctttcaactaaatgcgaggag 360
||||||||||||| |||| |||||| ||||||||||||||| | |||| ||||||
Sbjct: 301 atagctctctcttgtttgggtgctgcacttcacaaggtgcttttggccaaattggaggag 360
Query: 361 aatattttacaggttggcgcgaagattaacatccgtcttcacaactaccctgaatcaatg 420
||||||||| ||| |||||||||||| || || |||||||||||||| ||||||||||||
Sbjct: 361 aatattttagaggatggcgcgaagataaatattcgtcttcacaactatcctgaatcaatg 420
Query: 421 attgctctgaaaaacctaaaagcagcatatattgataagcttgtgtctgtgcgagggaca 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 421 attgctttgaaaaacctaaaagcagcatatattgataagcttgtgtctgtgcgggggact 480
Query: 481 gtagtaaaagttagcacagttaggcctttggtggtacaaatgagttttgattgtgaaaag 540
||||| ||| | ||||| ||||||||| | ||||| |||||||| ||||| |||||||||
Sbjct: 481 gtagtgaaactaagcactgttaggcctcttgtggtgcaaatgagctttgactgtgaaaag 540
Query: 541 tgtaaatctaacatcgcacgcatatttcctgatggaaaattttcaccaccaactatttgt 600
|||||||| |||||| ||| ||||||||||||||||||| || || ||||||||||||
Sbjct: 541 tgtaaatccaacatcatacgtgtatttcctgatggaaaattctcgcctccaactatttgt 600
Query: 601 aacttaaacggatgcaaaagtagaacttttcatcccattcgatcttctgctcaagccgta 660
|||||||| || |||||||| | ||| || ||||||||||| ||||||||||| ||| ||
Sbjct: 601 aacttaaatgggtgcaaaagcaaaacattccatcccattcggtcttctgctcaggccata 660
Query: 661 gattttcagaaaataaggatacaggaattactaaggtctgaagatcatgaagaagggcga 720
|||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 661 gattttcagaaaataaggatacaggagttactgaggtcagaagatcatgaagaagggcgg 720
Query: 721 gttcctcggacagtggaatgtgaactgactgaagatcttgttgatgcatgcatccctggg 780
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gttcctcgaacagtggaatgtgaactgactgaagatcttgttgatgcatgcatccctgga 780
Query: 781 gatgtggtaactgtcactggaattataagaacaataaacaattatgtggatattggagga 840
|| ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 781 gacgtggtgactgttactggaattataagaacaattaacaattatgtggatattggagga 840
Query: 841 ggaaaattgaaaggcaaaaatcaaggattttactatttgtacctggaaggagtttccata 900
||||||| ||||| ||||||||||| |||||||||||||| || |||| |||| |||
Sbjct: 841 ggaaaatcaaaaggaaaaaatcaagggttttactatttgtatctagaagtgatttcaata 900
Query: 901 aaaaattccaagtcacaatctacttcttttgattttcaagattccaagtctaatgctaga 960
||||||||||||||||||||||| |||| |||| | |||||| ||| |||||||||||||
Sbjct: 901 aaaaattccaagtcacaatctacatcttctgatatgcaagatgccaggtctaatgctaga 960
Query: 961 gctacagagctgtctgatttgttctcattttctccaaggggatttggaattcattgtgaa 1020
||||| ||||| |||||||||||||| |||||||| | |||||||||||| ||||||||
Sbjct: 961 gctacggagctctctgatttgttctcgttttctccta-aggatttggaatttattgtgaa 1019
Query: 1021 gttttctgaagaatatggttctgatattttccgtcaaataattcaatctatctgtccttc 1080
|||||| |||||||||||||| ||| | || || ||| || | ||||| || || || ||
Sbjct: 1020 gttttcggaagaatatggttcggatgtcttacggcaattagtgcaatccatatgcccctc 1079
Query: 1081 aatctatggacatgaacttgtcaaag 1106
||| ||||||||||||||||| ||||
Sbjct: 1080 aatttatggacatgaacttgttaaag 1105