Jatropha Genome Database

JcCA0065831.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0065831.30 - phase: 1 /partial/short
         (98 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013783 glyceraldehyde 3-phosphate dehydrogenase, putative      100   3e-21
30190.m010986 glyceraldehyde 3-phosphate dehydrogenase, putative       82   6e-16

>30147.m013783 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 1014

 Score = 99.6 bits (50), Expect = 3e-21
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   acccagaggagattccatggggtcaaactggtgctgagtttgttgttgaatctactggtg 60
           ||||||||||||| ||||||| | ||||||| || |||| | |||| ||||| |||||||
Sbjct: 248 acccagaggagatcccatgggctgaaactggagcggagtatattgtggaatcaactggtg 307

                                                 
Query: 61  ttttcactgacaaggaaaaggctgcagctcacttgaag 98
           |||||||||||||||| |||||||| ||||| ||||||
Sbjct: 308 ttttcactgacaaggacaaggctgctgctcatttgaag 345


>30190.m010986 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 888

 Score = 81.8 bits (41), Expect = 6e-16
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaggagattccatggggtcaaactggtgctgagtttgttgttgaatctactggtgttttc 65
           ||||||||||||||||| || |  |||||||| |  || ||||| || ||||||||||| 
Sbjct: 127 gaggagattccatggggacagagcggtgctgactacgtagttgagtccactggtgttttt 186

                                            
Query: 66  actgacaaggaaaaggctgcagctcacttgaag 98
           ||||||||||| |||||||| ||||||||||||
Sbjct: 187 actgacaaggacaaggctgctgctcacttgaag 219