Jatropha Genome Database
- JcCA0065831.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0065831.20 + phase: 1 /pseudo/partial
(227 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m010986 glyceraldehyde 3-phosphate dehydrogenase, putative 137 3e-32
30147.m013783 glyceraldehyde 3-phosphate dehydrogenase, putative 103 4e-22
47543.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative 100 7e-21
>30190.m010986 glyceraldehyde 3-phosphate dehydrogenase, putative
Length = 888
Score = 137 bits (69), Expect = 3e-32
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 4 atggagtgaacagtggtcattagaccctcaacaatcccaaacctatcatttactaccttg 63
|||||||| ||||| ||||| ||||||||| |||| ||||| | || | | |||||
Sbjct: 422 atggagtggacagttgtcataagaccctcagcaataccaaatttgtcgtgaataacctta 363
Query: 64 gccaagggggcaagacagttagtagtgcagctagcattggaaacaatgtcaagctctggc 123
||||| || ||||||||||| |||||||||||||||||||| ||||||| ||| || | |
Sbjct: 362 gccaaaggagcaagacagttggtagtgcagctagcattggagacaatgttaaggtcagac 303
Query: 124 ttatattcattctcattaacacccacaacaaacataggtgcatctttgctaggagcagag 183
|| || || ||||||||||| |||| ||||||||| || ||||||||||| || ||||||
Sbjct: 302 ttgtagtccttctcattaactcccataacaaacatgggagcatctttgctcggggcagag 243
Query: 184 ataacaaccttcttagcaccaccct 208
|||| |||||||| ||||||||||
Sbjct: 242 ataattaccttctttgcaccaccct 218
>30147.m013783 glyceraldehyde 3-phosphate dehydrogenase, putative
Length = 1014
Score = 103 bits (52), Expect = 4e-22
Identities = 169/208 (81%)
Strand = Plus / Minus
Query: 1 gtgatggagtgaacagtggtcattagaccctcaacaatcccaaacctatcatttactacc 60
|||||||| || ||||| ||||| |||||||| || || ||||| | || || | |||
Sbjct: 551 gtgatggaatggacagttgtcataagaccctctacgatgccaaatcggtcgttaatgacc 492
Query: 61 ttggccaagggggcaagacagttagtagtgcagctagcattggaaacaatgtcaagctct 120
||||| | ||| ||||| ||||| |||||||| ||||||||||| | ||||| ||| |||
Sbjct: 491 ttggcgaggggagcaaggcagttggtagtgcaactagcattggatataatgtgaagatct 432
Query: 121 ggcttatattcattctcattaacacccacaacaaacataggtgcatctttgctaggagca 180
||| | ||||| |||||||| ||||| ||||||||||| || ||||| ||||| || ||
Sbjct: 431 ggcgtgtattccttctcattcacaccaacaacaaacatgggagcatccttgcttggggct 372
Query: 181 gagataacaaccttcttagcaccaccct 208
||||| | || ||||||||||||||||
Sbjct: 371 gagatgatgactttcttagcaccaccct 344
>47543.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative
Length = 621
Score = 99.6 bits (50), Expect = 7e-21
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 1 gtgatggagtgaacagtggtcattagaccctcaacaatcccaaacctatcatttactacc 60
||||||||||| ||||| ||||| |||||||| ||||| ||||| | || || | |||
Sbjct: 158 gtgatggagtggacagttgtcataagaccctcgacaatgccaaatcggtcgttaatgacc 99
Query: 61 ttggccaagggggcaagacagttagtagtgcagctagcattggaaacaatgtcaagctct 120
||||| | ||| ||||| ||||| |||||||| ||||||||||| | ||||| ||| |||
Sbjct: 98 ttggcgaggggagcaaggcagtttgtagtgcaactagcattggatataatgtgaagatct 39
Query: 121 ggcttatattcattctcattaacacccacaacaaacat 158
|| | ||||| |||||||||||||| |||||||||||
Sbjct: 38 ggtgtgtattccttctcattaacaccaacaacaaacat 1