Jatropha Genome Database
- JcCA0062551.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0062551.10 + phase: 0 /partial
(1614 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29631.m001012 pentatricopeptide repeat-containing protein, putative 985 0.0
>29631.m001012 pentatricopeptide repeat-containing protein, putative
Length = 1452
Score = 985 bits (497), Expect = 0.0
Identities = 1195/1424 (83%), Gaps = 4/1424 (0%)
Strand = Plus / Plus
Query: 115 ttgtttgatgaattgcctgagagaaatttagccacgtggaatttggttttgcgtggattt 174
|||||||| ||||||||||||||||||||||| | |||||| |||| || || || |||
Sbjct: 28 ttgtttgacgaattgcctgagagaaatttagcaatatggaatgtggtgttacgcgggttt 87
Query: 175 tgcgaattaggtctgtttgatgagttattaggattatacaatgaaataaaattggataat 234
|| || | |||| ||||||||||||||| || | |||||||||| ||| | ||||||
Sbjct: 88 tgtgagctgggtcgatttgatgagttattaagaatttacaatgaaacgaaactagataat 147
Query: 235 gtggagcttaatgggctcagtttttgttatttgatccgcggatgttctaacaagaggttt 294
||||||| ||||| || || ||||| ||||||||||| ||||||| |||||| | ||||
Sbjct: 148 ttggagctaaatggccttagcttttgctatttgatccgtggatgttgtaacaaaacgttt 207
Query: 295 ttcgatgaagggagtcagctgcatggtcatgtgattaaggttggatgggtagacacaaat 354
||| |||||||||| ||||||||| | ||||||||||||||||| |||||| || |||||
Sbjct: 208 ttcaatgaagggaggcagctgcattgccatgtgattaaggttggttgggtaaactcaaat 267
Query: 355 atttttgttgctaatgctttggtagatttttattctgcatgtgggtgtttaagtgaggca 414
||||||||||||||||||||||| |||||||| |||||||||||| |||||| ||| |||
Sbjct: 268 atttttgttgctaatgctttggtggatttttactctgcatgtgggagtttaaatgatgca 327
Query: 415 aagaaatcttttcaagctattccaatggaggatgttctatcatggaactcaatgttgtca 474
|||| ||| ||||||||||||||| | ||||||||| |||| ||||| ||||| ||||||
Sbjct: 328 aagatatcatttcaagctattccactcgaggatgttatatcgtggaattcaatattgtca 387
Query: 475 gtatatgcagataatggcttatttcttgatgctcttgaattattgtacattatgcagttt 534
|| | |||||||||||||||| | ||||||||||||||||||| || || |||||||||
Sbjct: 388 gtgtgtgcagataatggcttacattttgatgctcttgaattattttatatgatgcagttt 447
Query: 535 tggggcaagaaaccgtcaattcgttcatttgtagggttcttaaatctgtctagtaagact 594
||||| |||||||| || ||||| |||||||| |||||| ||||| |||| |||| || |
Sbjct: 448 tggggtaagaaaccttcgattcgctcatttgttgggttcctaaatttgtcaagtatgaat 507
Query: 595 ggcaatgcgctatttggaatgcaaattcactgttgtgtaataaaaatgggttttgacaat 654
|| || ||||||| | || |||||||||||||| | || |||||||| | |||
Sbjct: 508 ggagatattgtatttgggaaacagattcactgttgtgtcgtcaagctgggtttttataat 567
Query: 655 gggagtgttcatgtacaatctgcattgattgacatgtatgggaaatgcggggacattaag 714
|||||||| ||||||||||||||| | |||||||||||||||||||| |||||| ||
Sbjct: 568 gggagtgtgcatgtacaatctgcactaattgacatgtatgggaaatgttttgacattgag 627
Query: 715 aatgcagtatccacgtatgaaagtcttcccatgacatcgttggagtgttgtaattcctta 774
||| | | || |||||||||||||| | || | | |||||||||||||| || |||
Sbjct: 628 aattcgatttctgtatatgaaagtcttcctaagagaactttggagtgttgtaactcatta 687
Query: 775 atgacctctttgttgcactgtggcattgttgatgatgtgtttgagatgtttggtttgatg 834
|||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||
Sbjct: 688 atgacctctttgttgcacagtggctttgttgatgatgtgattgatatgtttggtttgatg 747
Query: 835 gttgacgaaggaattggacttgacgaggtaacattttccaccgtattgaaagcattatca 894
||||| ||||||||||||||||| ||| | || |||| || |||||||||||||||| |
Sbjct: 748 gttgatgaaggaattggacttgatgagtttacgttttgtacagtattgaaagcattatta 807
Query: 895 gagtcagttttggtaagcttggaaagctgcggattggtgcattgttgtgccataaaacta 954
||||| ||||| ||||| |||| |||||| |||||||||||||||||| |||||| |
Sbjct: 808 gagtccgttttagtaagtttggctagctgcagattggtgcattgttgtgtaataaaattt 867
Query: 955 ggttatgaatctgatgtttctgtttcatgttcattaatagatgcatatttgaggtctggt 1014
|| | |||||||||| |||| ||||||||||| || ||||||| ||||| |||||||||
Sbjct: 868 ggctttgaatctgatatttcagtttcatgttccttgatagatggatattctaggtctggt 927
Query: 1015 catgttctactttcgcaaaaggtttttgaacaaattcctttaccaaatgtcttctgtttc 1074
| ||| ||||| ||||||||||| ||| | ||| ||||||||||||||||||
Sbjct: 928 aaagttgagctttcacaaaaggttttctcacagctctcttcaccaaatgtcttctgtttg 987
Query: 1075 acatcaatcatcaatgggtttgcctggaatggattgggaaaacaatgtctcgaaatgctt 1134
||||||||||||||||| |||||| | ||||| |||||| | ||||||| || || ||
Sbjct: 988 acatcaatcatcaatggatttgcccgaaatgggatgggaagagaatgtctagagattttt 1047
Query: 1135 gaagccatgatccggaagggtttgaaacctgatagggttactttcttgtgtgtgttaacc 1194
|| ||||||||| |||||| |||||||||||| || || |||||||||||||||||
Sbjct: 1048 gagaccatgatccaaaagggtctgaaacctgataaagtgacattcttgtgtgtgttaact 1107
Query: 1195 gggtgcagccattctggtttggttgaagaaggaagattggttttcaattcaatggaatct 1254
|||||||| |||||||| ||||||||||||||||||| |||||| ||||||||| ||||
Sbjct: 1108 gggtgcagtcattctgggttggttgaagaaggaagatcggtttttaattcaatgacatct 1167
Query: 1255 ctacatgggatttctccggacagggatcatttttcatgtatggtagatctgctgggccga 1314
||||| |||| || ||||| || ||| |||| || |||||||||||| |||| |||
Sbjct: 1168 aggcatggaatttgcccagacagagagcatctttcctgcatggtagatctgttggggcga 1227
Query: 1315 gcaggtctgctggatgaagctgaagaattgctagaacaaacaccgggaaggggtgattgt 1374
|||||||||||||||||||||||||||||||| ||| ||||| |||||||| |||
Sbjct: 1228 gcaggtctgctggatgaagctgaagaattgctgcaacggacaccaggaagggggacttgc 1287
Query: 1375 gtgatgtggagttcattgttgcgaagttgtagggtccacaggaatgaaactgtgggaaga 1434
|| |||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 1288 gttatgtggagctcattgttgagaagttgtagggtccacaggaatgaaatggtgggaaga 1347
Query: 1435 agagcggcaaaaatactgctgggacttgatccagaagattttgcagttcatttgcaagtc 1494
||||| || ||||| | ||| |||||||||||| |||||||||||| | ||||||
Sbjct: 1348 agagcagc-aaaattttattggaacttgatccagacgattttgcagtt--atcgcaagta 1404
Query: 1495 tcaaacttttattctgagactggggaatttgaagcctcaatgca 1538
|||||| |||||||||| | ||||||||||||||| ||||||||
Sbjct: 1405 tcaaac-tttattctgaaattggggaatttgaagcttcaatgca 1447