Jatropha Genome Database
- JcCA0060621.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0060621.10 + phase: 2 /partial
(484 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30008.m000797 3-isopropylmalate dehydratase, putative 458 e-128
30008.m000798 3-isopropylmalate dehydratase, putative 412 e-115
>30008.m000797 3-isopropylmalate dehydratase, putative
Length = 1533
Score = 458 bits (231), Expect = e-128
Identities = 354/395 (89%)
Strand = Plus / Plus
Query: 2 tttctttcagagtacagatttgatatctcaaagttggagccattggttgcaaagcctcat 61
|||||||| ||||| ||||||||| ||||||| ||||| |||||||| ||||||||||||
Sbjct: 1000 tttctttccgagtatagatttgatgtctcaaaattggaaccattggtcgcaaagcctcat 1059
Query: 62 tctcctgataatcgggctttagcaagagaatgcaaagatgtcaaaatagacagagtgtac 121
||||||||||| | |||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 1060 tctcctgataactgtgctttagcaagagaatgcaaagatgtcaaaattgacagagtatac 1119
Query: 122 attggatcctgtactggtggaaaaacagaggattttatggctgctgccaaagtttttcta 181
|||||||| || |||||||| |||||||||||||||||||| || |||||||||||| ||
Sbjct: 1120 attggatcttgcactggtgggaaaacagaggattttatggcagcagccaaagttttttta 1179
Query: 182 gcttcaggtaaaaaggtcaaggttcccacgtttcttgtgcctgcaacccaaaaggtatgg 241
|||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1180 gcttcaggtaaaaaggtcaaggttccaacgtttcttgtccctgctacccaaaaggtttgg 1239
Query: 242 atggatgtatatagtttaccagtaccggggtctggtggcaggacttgctcccagattttt 301
||||| || |||||| | || ||||| || |||||||| | |||||||| |||||||||
Sbjct: 1240 atggacgtctatagtctccctgtaccaggatctggtggaaaaacttgctctcagattttt 1299
Query: 302 gaagaagctggttgtgacacacctgcaagtcctagttgtggtgcatgcttgggaggcccc 361
|||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 1300 gaagaagctggttgtgacacgcctgcaagtcctagttgtggtgcttgtttgggaggccct 1359
Query: 362 aaggacacttatgcacgcatgaatgaaccaatggt 396
|| || || |||||||| ||||| |||||||||||
Sbjct: 1360 aaagatacctatgcacgaatgaacgaaccaatggt 1394
>30008.m000798 3-isopropylmalate dehydratase, putative
Length = 1866
Score = 412 bits (208), Expect = e-115
Identities = 346/392 (88%)
Strand = Plus / Plus
Query: 5 ctttcagagtacagatttgatatctcaaagttggagccattggttgcaaagcctcattct 64
||||||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||
Sbjct: 1336 ctttcagagtacagatttgatatctcaaaattggaacccttggtcgcaaagcctcattct 1395
Query: 65 cctgataatcgggctttagcaagagaatgcaaagatgtcaaaatagacagagtgtacatt 124
|| || ||||| |||||||||||||||||||||||||| ||||| ||||| || ||||||
Sbjct: 1396 ccagacaatcgtgctttagcaagagaatgcaaagatgtgaaaattgacagggtctacatt 1455
Query: 125 ggatcctgtactggtggaaaaacagaggattttatggctgctgccaaagtttttctagct 184
|||||||||||||||||||||||||| ||||||| |||||| || ||||||||||| |||
Sbjct: 1456 ggatcctgtactggtggaaaaacagaagattttacggctgcagcaaaagtttttcttgct 1515
Query: 185 tcaggtaaaaaggtcaaggttcccacgtttcttgtgcctgcaacccaaaaggtatggatg 244
|||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 1516 tcaggtaaaaaggtcaaggttcccacttttcttgtccctgcaacccagaaggtttggatg 1575
Query: 245 gatgtatatagtttaccagtaccggggtctggtggcaggacttgctcccagatttttgaa 304
||||||||||| | |||||||| || |||||||||| |||||||| | ||| || |||
Sbjct: 1576 gatgtatatagcatcccagtaccaggatctggtggcaaaacttgctcacggatattcgaa 1635
Query: 305 gaagctggttgtgacacacctgcaagtcctagttgtggtgcatgcttgggaggccccaag 364
||||||||||| ||||| || ||||||||| | || | || || |||||||||| |
Sbjct: 1636 gaagctggttgcgacacgccggcaagtcctggctgcagcgcttgtatgggaggccctaga 1695
Query: 365 gacacttatgcacgcatgaatgaaccaatggt 396
||||| ||||||||||||||||||||||||||
Sbjct: 1696 gacacctatgcacgcatgaatgaaccaatggt 1727