Jatropha Genome Database

JcCA0046021.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0046021.30 - phase: 0 /partial
         (177 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002079 ribosome recycling factor, putative                     107   2e-23

>29647.m002079 ribosome recycling factor, putative
          Length = 744

 Score =  107 bits (54), Expect = 2e-23
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtggcattgaggaatatcagaagagatgcattgaaagcctgtgagaaacttgagaaggnn 60
           |||||||| |||||||||||||||||||| |||||||||| ||| |||||||||||||  
Sbjct: 607 gtggcattaaggaatatcagaagagatgctttgaaagcctatgaaaaacttgagaaggaa 666

                                              
Query: 61  nnnnngctttcagaggataatgtgaaggacttgtc 95
                |||||||||||| |||||||||||||||||
Sbjct: 667 aagaagctttcagaggacaatgtgaaggacttgtc 701