Jatropha Genome Database
- JcCA0045831.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0045831.30 - phase: 1 /partial
(1313 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014101 Protein kinase APK1A, chloroplast precursor, putative 696 0.0
29736.m002016 Protein kinase APK1A, chloroplast precursor, putative 103 3e-21
29739.m003755 Protein kinase APK1B, chloroplast precursor, putative 60 4e-08
30018.m000550 Protein kinase APK1B, chloroplast precursor, putative 54 2e-06
>30147.m014101 Protein kinase APK1A, chloroplast precursor, putative
Length = 1080
Score = 696 bits (351), Expect = 0.0
Identities = 725/849 (85%), Gaps = 23/849 (2%)
Strand = Plus / Plus
Query: 204 attggagaaggtggatttggtgatgtgtacaaggggtggattaatgaacaaacacttggt 263
||||||||||| |||||||||| ||| |||||||||||||| |||| || | ||||||
Sbjct: 127 attggagaaggaggatttggtgctgtttacaaggggtggatagatgagcacatccttggt 186
Query: 264 gctgcaaggtctgggcatgggatggtggttgctgtcaagaaacttaaaccagatggtttt 323
||||||||||||||||| |||||||| |||||||||||||||||||||||||||| | ||
Sbjct: 187 gctgcaaggtctgggcaggggatggttgttgctgtcaagaaacttaaaccagatgctctt 246
Query: 324 cagggtcacaaggagtggctgtctgaggtcaattatctcggacaacttcatcatcccaat 383
|||||||||||||||||| ||||||||||| ||| ||| || ||||||||||||||||||
Sbjct: 247 cagggtcacaaggagtgggtgtctgaggtctattttcttggtcaacttcatcatcccaat 306
Query: 384 cttgtcaaactcgttggatactgcctagatgggaaaaaccggcttttagtctatgaatat 443
||||||||||| ||||||||||||| || ||| || |||||||||| |||||||| |||
Sbjct: 307 cttgtcaaacttattggatactgcctggaaggggaacaccggcttttggtctatgagtat 366
Query: 444 atgcctaaaggcagccttgagaatcatctgtttaaaa-------------------gtga 484
||| | ||||||||||| ||||||||||||||||||| | ||
Sbjct: 367 atgtcaaaaggcagcctggagaatcatctgtttaaaacactgactagtgtgaataagaga 426
Query: 485 ggctcaaccattgtcctgggctttaaggataaaagttgcaataggtgctgctcgagggct 544
||||||||| ||||||||| | ||||||| ||| |||| | || ||||||||| |||||
Sbjct: 427 ggctcaaccgctgtcctgggatctaaggatcaaaattgccacagatgctgctcgtgggct 486
Query: 545 ctccttcatgcatgactctgagcagaaaattatataccgtgattttaaagcagccaatat 604
||||||| |||||||||| ||| | |||||||||| |||||||| || ||| | || ||
Sbjct: 487 ctccttcc-gcatgactctcagctgcaaattatatatcgtgatttcaaggcatctaacat 545
Query: 605 cctattagattcggaattcaatgctaaactttcagactttggcttggcaaaagcaggccc 664
||| ||||| |||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 546 ccttttagactcggaacataatgcaaaactttcagactttggcttggcaaaagcaggccc 605
Query: 665 caccggtgatcattctcatgtttcgactcaggttctgggtactcaaggctatgctgctcc 724
|| |||||||| ||||||| |||||||| ||||||||||||||||||||||| || ||
Sbjct: 606 tactggtgatcacactcatgtctcgactcaagttctgggtactcaaggctatgccgcccc 665
Query: 725 tgaatatattgctacaggtaggctaactactaagtgtgatgtctatagcttcggggttgt 784
||||||||| |||||||||||||||||| | || ||||||||||||||||| || |||||
Sbjct: 666 tgaatatatcgctacaggtaggctaactgcaaaatgtgatgtctatagctttggagttgt 725
Query: 785 gttactggagttgctgacaggacgccgtgccctcgacaaaacaaaagttgggatagaaca 844
||| ||||||||||||||||||||||| || || |||||||||||||||||||||||| |
Sbjct: 726 gttgctggagttgctgacaggacgccgagctcttgacaaaacaaaagttgggatagaaaa 785
Query: 845 gaattctggtggagtgggcgaagccttattttgggtgataggcgcaagttgttccgaatt 904
||| || ||||| ||||| || || || | ||||||||||||||||| | ||||| |||
Sbjct: 786 gaa-cctagtggattgggcaaaacccta-tctgggtgataggcgcaagctcttccggatt 843
Query: 905 atggatatcaagttggagggccagtactccccacagaggagctttcatggttgcacttct 964
||||||| |||||| ||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 844 atggatacaaagttgcagggccagtac-cctcagagaggagctttcatggttgcacttct 902
Query: 965 tgctttacattgtataagtgaagctaaactccggccaccaatgtccgaggttttaactac 1024
||||| ||| || || |||| |||||||||||||| ||||| | || |||||||||||
Sbjct: 903 tgcttcacagtgcatcggtgaggctaaactccggccgtcaatggctgatgttttaactac 962
Query: 1025 tttagaaga 1033
|||||||||
Sbjct: 963 tttagaaga 971
>29736.m002016 Protein kinase APK1A, chloroplast precursor, putative
Length = 1260
Score = 103 bits (52), Expect = 3e-21
Identities = 142/172 (82%)
Strand = Plus / Plus
Query: 616 cggaattcaatgctaaactttcagactttggcttggcaaaagcaggccccaccggtgatc 675
||||||||||||| ||||| || || ||||| ||||| || | ||| ||||| ||||||
Sbjct: 680 cggaattcaatgccaaactgtctgattttggtttggccaaggaagggcccactggtgata 739
Query: 676 attctcatgtttcgactcaggttctgggtactcaaggctatgctgctcctgaatatattg 735
||||||| |||||||| || |||||||||| |||||||| || ||||||||| |||
Sbjct: 740 gaactcatgtgtcgactcaagtcatgggtactcatggctatgcagcacctgaatatgttg 799
Query: 736 ctacaggtaggctaactactaagtgtgatgtctatagcttcggggttgtgtt 787
||||||||||||| || | ||| ||||||| || ||||| |||||||||||
Sbjct: 800 ctacaggtaggctgacagcaaagagtgatgtatacagctttggggttgtgtt 851
Score = 85.7 bits (43), Expect = 6e-16
Identities = 145/179 (81%)
Strand = Plus / Plus
Query: 297 gtcaagaaacttaaaccagatggttttcagggtcacaaggagtggctgtctgaggtcaat 356
|||||||| |||||||| || ||||| ||||| |||||||||||| || | || || |
Sbjct: 361 gtcaagaagcttaaacctgagggtttccagggccacaaggagtggttgacagaagttagg 420
Query: 357 tatctcggacaacttcatcatcccaatcttgtcaaactcgttggatactgcctagatggg 416
||||| || || ||||||||||| ||||| |||||||| |||| |||||| | || ||
Sbjct: 421 tatcttggccagcttcatcatccaaatctggtcaaactgattggttactgcttggagggt 480
Query: 417 aaaaaccggcttttagtctatgaatatatgcctaaaggcagccttgagaatcatctgtt 475
| |||||||| || |||||||| | |||||| ||||| ||| | ||||||||||||||
Sbjct: 481 gagaaccggctattggtctatgagtttatgccgaaagggagcttggagaatcatctgtt 539
>29739.m003755 Protein kinase APK1B, chloroplast precursor, putative
Length = 1356
Score = 60.0 bits (30), Expect = 4e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 700 tgggtactcaaggctatgctgctcctgaatatat 733
|||| |||||||||||||||||||||||||||||
Sbjct: 743 tgggaactcaaggctatgctgctcctgaatatat 776
>30018.m000550 Protein kinase APK1B, chloroplast precursor, putative
Length = 1317
Score = 54.0 bits (27), Expect = 2e-06
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 572 aattatataccgtgattttaaagcagccaatatcctattagattcggaattcaatgctaa 631
||||||||||||||||||||| || |||| |||||| | |||||| | ||||| || ||
Sbjct: 654 aattatataccgtgattttaagacatccaacatcctactggattcgaacttcaacgcaaa 713
Query: 632 actttcagactttgg 646
|||||||| |||||
Sbjct: 714 gctttcagattttgg 728