Jatropha Genome Database

JcCA0045571.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0045571.10 - phase: 0 
         (528 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29980.m000173 mannose-6-phosphate isomerase, putative                 202   2e-51
30066.m000716 mannose-6-phosphate isomerase, putative                  66   2e-10

>29980.m000173 mannose-6-phosphate isomerase, putative
          Length = 1125

 Score =  202 bits (102), Expect = 2e-51
 Identities = 249/298 (83%)
 Strand = Plus / Plus

                                                                       
Query: 52  agactgaaatgttcagttcagaattacgattggggtaaaattggtttggattcaaaggtt 111
           ||||||| ||||||||| ||||||||  |||||||||||||||| |  |||||  |||| 
Sbjct: 34  agactgagatgttcagtccagaattataattggggtaaaattgggtctgattctcaggtc 93

                                                                       
Query: 112 gggaggctttatgaattgaattctgggtctcaaattgatgtcggcaagccttatgcagaa 171
           |  | ||||||||   |||||||||||||| ||||||| || |  ||||||||||| || 
Sbjct: 94  gcaaagctttatgctctgaattctgggtctgaaattgaagttgataagccttatgccgag 153

                                                                       
Query: 172 ctttggatgggaacccatgagtctggaccgtcttttgttgtggaaaatggagtagagaat 231
           ||||||||||| |||||||| ||||| || || ||||||||||||| ||| |  ||||||
Sbjct: 154 ctttggatggggacccatgattctgggccttcatttgttgtggaaagtggtggggagaat 213

                                                                       
Query: 232 ggaaacccaattgggtctcatagtattagtttgaaagaatggatttttaagaaccctaat 291
           || |    |||||||||||| ||| | ||||||||||| ||||||  |||||| ||||||
Sbjct: 214 gggattggaattgggtctcaaagtctgagtttgaaagactggattgctaagaatcctaat 273

                                                                     
Query: 292 gtgctaggagataaggtgcttgataagtggggctgtgatctccctttcttgttcaagg 349
           ||||| || |||||||| |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 274 gtgcttggtgataaggttcttgataagtggggttgtgatctcccgttcttgttcaagg 331


>30066.m000716 mannose-6-phosphate isomerase, putative
          Length = 1341

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 147/185 (79%)
 Strand = Plus / Plus

                                                                       
Query: 326 gtgatctccctttcttgttcaaggtactttctgtggcaaaagcattgtcaattcaagctc 385
           ||||||| |||||||| ||||||||| ||||||| |  ||||| ||||| || ||||| |
Sbjct: 344 gtgatcttcctttcttattcaaggtaatttctgtagggaaagccttgtctatacaagccc 403

                                                                       
Query: 386 atcctgataaagaattggccaaaatgcttcataagctgcacccagatgtttacaaggatg 445
           |||| ||||| |||||||| ||    || || |||   || |||  | |||| |||||||
Sbjct: 404 atccagataaggaattggcaaaggccctgcacaaggctcagccaagtatttataaggatg 463

                                                                       
Query: 446 ataaccataagcctgagatggctttggctataacagagtttcaggctctttgtggtttta 505
           |||| || |||||||||||||| || ||  | ||||| ||| |||||||||| || ||||
Sbjct: 464 ataatcacaagcctgagatggcattagcacttacagaatttgaggctctttgcggattta 523

                
Query: 506 tcagt 510
           |||||
Sbjct: 524 tcagt 528