Jatropha Genome Database
- JcCA0045271.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0045271.20 - phase: 0
(1140 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29929.m004546 peptide chain release factor, putative 1239 0.0
>29929.m004546 peptide chain release factor, putative
Length = 1377
Score = 1239 bits (625), Expect = 0.0
Identities = 991/1113 (89%)
Strand = Plus / Plus
Query: 1 atgcaagatttctatagcttgaggagggatgttgaagctgcctcagagcgtgttgaagag 60
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 247 atgcaagatttctatagcttaaggagggatgtggaagctgcatcagagcgtgttgaagag 306
Query: 61 attattgcctctgctggtatgcagctattacaacaagaacttgcaggtttagaagcgaaa 120
|||| ||||||||||| | |||| |||| |||||||| || || ||||||| | |||
Sbjct: 307 attagaacctctgctggtcttcagcaattagaacaagaagttacaaatttagaatctaaa 366
Query: 121 gcagctgatagctccttatgggatgaccgtgctagagctcaggaaatcctttcggctctc 180
|||||| ||| || || |||||||||||||||| |||||| |||| |||| ||||||
Sbjct: 367 gcagctaatacttctttctgggatgaccgtgctacagctcaagaaactcttttggctctt 426
Query: 181 acagatgtcaaagataagataaaactattgactgaattcaaaaccatggttgaagatgca 240
|| ||||| ||||||||||||||||| | || || |||||||||| |||||||||||||
Sbjct: 427 actgatgtgaaagataagataaaactgcttacagagttcaaaaccaaggttgaagatgca 486
Query: 241 gaaactatagttaagctaacagaagagatggactccacagatgctggacttctcgaagag 300
|||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||||
Sbjct: 487 gaaactatagttaagctaacagaagagatggattccatagatactggacttcttgaagag 546
Query: 301 gcaactgctatagttaaagaattaaacaagtcattagatcgatttgagttgactcaactt 360
|| | |||| |||||||| ||||||||||| | || ||||||||||| |||||||||
Sbjct: 547 gcttcgagtataattaaagaactaaacaagtcactggagcgatttgagttaactcaactt 606
Query: 361 ctttcaggcccctatgacaaagaaggtgctgttatatctatcacagctggtgctggaggc 420
||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 607 ctttcaggcccttatgacaaagaaagtgctgttatatcaatcacagctggtgctggaggc 666
Query: 421 actgatgcgcaggactgggctgacatgcttcttaggatgtatctgagatggggagagaaa 480
||||| || |||||||||||||||||||| || ||||||||| |||||||||||||||||
Sbjct: 667 actgacgcacaggactgggctgacatgctcctcaggatgtatgtgagatggggagagaaa 726
Query: 481 caacgatacaagacaagagtggtagaaaagtccccaggagaggaagctggaattaagtca 540
||| ||||||||||||| || || ||||| || |||||||||||||||||||||||||||
Sbjct: 727 caaagatacaagacaagggttgttgaaaaatcaccaggagaggaagctggaattaagtca 786
Query: 541 gttaccattgaaatcgaaggccgttatgcttacggatatctatctggggagaaaggaaca 600
| | |||||| | ||||| ||||||||||| |||||| | |||||||||||||||||
Sbjct: 787 gccatgattgaagttgaaggtcgttatgcttatggatatttgtctggggagaaaggaacc 846
Query: 601 catagaattgtacggcaatctcctttcaatgccaaaggtcttcgtcagactagcttttca 660
||||||||||| || ||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 847 catagaattgtgcgacaatctcctttcaatgctaaaggtcttcgtcagacaagtttttct 906
Query: 661 ggtgttgaagtcatgcctcttcttcctgaagagtctatggatgttgaaatacctgaggag 720
||| | |||||||||||||||||||||||||| |||||||| |||||| | |||||||||
Sbjct: 907 ggtatcgaagtcatgcctcttcttcctgaagaatctatggacgttgaacttcctgaggag 966
Query: 721 gatctggaaatcactttttcaagggcaggtgggaaaggaggccagaatgtaaataaggtt 780
|| |||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||
Sbjct: 967 gacctggaaatcagtttctccagggcaggtggaaaaggaggccagaatgtaaataaggtt 1026
Query: 781 gaaactgctgtccggattactcacatccccactggtgtcactgttcgctgcacagaagag 840
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1027 gaaactgctgtcaggattactcacatccccactggtgttactgttcgctgcacagaagag 1086
Query: 841 agatcccagcttgcgaacaagatcaaggctctcagccggttaaaagcaaagctattggtt 900
|||||||| || || |||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 1087 agatcccaactggcaaacaagataaaggctctcagccggttaaaagcaaagctactggtg 1146
Query: 901 atagctgtggagcaaagagcatctgaaatcaagcaaataagaggagatgcagtgaaagct 960
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 1147 atagctgtagagcaaagagcatctgaaatcaagcaaataaggggagacgcagtgaaagct 1206
Query: 961 gagtggggccaacagataagaaactacgtattccatccatacaaacttgtcaaagatgta 1020
|||||||||||||| ||||| || || ||||| ||||| ||||||||||| |||||||||
Sbjct: 1207 gagtggggccaacaaataaggaattatgtatttcatccgtacaaacttgtgaaagatgta 1266
Query: 1021 cggacaggatttgagacatcggatattaattctgtgatggatggagaattagagcccttc 1080
|||||||||| ||||| || ||| ||| |||||| |||||||| ||||| ||| |||||
Sbjct: 1267 cggacaggatacgagacttcagatgttacttctgttatggatggcgaattggaggccttc 1326
Query: 1081 atcaaagcttacctcaagtataagtacagtatg 1113
||||||||||| ||||||||||| |||||||||
Sbjct: 1327 atcaaagcttatctcaagtataaatacagtatg 1359