Jatropha Genome Database
- JcCA0044701.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0044701.20 - phase: 0
(789 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29726.m003893 Protein SSM1, putative 438 e-122
>29726.m003893 Protein SSM1, putative
Length = 795
Score = 438 bits (221), Expect = e-122
Identities = 524/625 (83%)
Strand = Plus / Plus
Query: 27 tcctattgattgcctcatcttcgatttggatgacactctgtattcttcgaagctgggaat 86
|||| |||||||||| || || |||||||||||||||||||||||||| ||||| |||||
Sbjct: 27 tccttttgattgcctaatttttgatttggatgacactctgtattcttcaaagcttggaat 86
Query: 87 agcagaagctctaaggaagaacatcgatgattttcttgttgaaaaatgtggatttccaga 146
|||||||||| ||||||| ||||| ||||||||||| ||||| |||||||||||| || |
Sbjct: 87 agcagaagctttaaggaaaaacatagatgattttctcgttgagaaatgtggatttgcaca 146
Query: 147 gaacaaagcttcaactctccgagttgagctctttaaaacttatggaagctctctagccgg 206
| ||||||| |||| ||| ||||||||||| || |||||||| || |||||||| |||||
Sbjct: 147 ggacaaagcctcaagtcttcgagttgagcttttcaaaacttacggcagctctctcgccgg 206
Query: 207 tttgagggctttggggtatgatatcgatgctgatgattatcacagtgtcgtgcacggaag 266
||||||||| || || || ||||| |||||||||||||| |||||| |||||||||||||
Sbjct: 207 tttgagggcattaggctacgatatagatgctgatgattaccacagtttcgtgcacggaag 266
Query: 267 attgccttatgatttaataaagccaaacggacaattacgtaacatcctgcgaagcatcac 326
|||||| || |||||||| |||||| | || |||||||| |||||| | | |||||| |
Sbjct: 267 attgccctacgatttaatcaagccagatggtcaattacgcaacatcttactaagcattcc 326
Query: 327 ccagagaaaaatcatattcaccaattcagacagagttcacgcgattaaggtcctaaaaag 386
||| |||||| | ||||||||||||||||| ||| ||||||||| ||| ||| ||||
Sbjct: 327 ccaaagaaaattaatattcaccaattcagatagaaatcacgcgatgaagtccctggaaag 386
Query: 387 attaggattagaagactgcttcgatcaaatcatatgctttgaaacaatgaatccaaatct 446
| | ||| | ||||| ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 387 acttggaattgaagattgcttcgatcaaatcatatgctttgaaactatgaatccaaactt 446
Query: 447 ctccaaatcgacacggcctgatgaattccctgttcttctcaaaccctcaatggacgccat 506
|| | ||| || || || ||||| || |||||||||||||| || ||||| || |||||
Sbjct: 447 atcaagatctactcgtccggatgagtttcctgttcttctcaagccatcaattgatgccat 506
Query: 507 gaagattgctctccaagttgccaacgttgatcctcgccgcacgttatttctcgacgacaa 566
||||||||||||||| ||||| || | | ||| |||||| || ||||| ||||||||
Sbjct: 507 gaagattgctctccacgttgctgacatcaacccttcccgcactttgtttcttgacgacaa 566
Query: 567 cgcaagaaatgtggcggcagggaaagctatgggtcttaggacagttctggttggcaaaac 626
|| | | |||||||| || || ||||||||||| || || || |||||||| || |||||
Sbjct: 567 cgtacgtaatgtggcagctggaaaagctatggggctgagtacggttctggtcggaaaaac 626
Query: 627 tgtgaagagcaaggaagcagattat 651
|||||||| || ||||| ||||||
Sbjct: 627 agtgaagagtaaagaagctgattat 651