Jatropha Genome Database

JcCA0044211.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0044211.20 - phase: 0 /pseudo/partial
         (297 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29841.m002903 glycerol kinase, putative                               202   8e-52

>29841.m002903 glycerol kinase, putative
          Length = 1566

 Score =  202 bits (102), Expect = 8e-52
 Identities = 210/246 (85%)
 Strand = Plus / Plus

                                                                        
Query: 52   caggccgacttgttgggaaatgcagttgtgagaccagctgatatagagacaacagctctt 111
            ||||| |||||| ||||| |  |||||||||| ||| |||||||||| ||||||||||||
Sbjct: 1318 caggcagacttggtgggacacccagttgtgaggccatctgatatagaaacaacagctctt 1377

                                                                        
Query: 112  ggagcagcctatgctgctggtttggctattggggtttggaaagaagaggagatttttgct 171
            ||||||||||||||||||||||||||| ||||| |||||| |||  ||||||||||||||
Sbjct: 1378 ggagcagcctatgctgctggtttggctgttgggatttggacagagaaggagatttttgct 1437

                                                                        
Query: 172  actggagaaaaggttaagacagcaaccactttccatcccaatttacatgagcaacagagg 231
             | |||||||||| ||||||||  ||||  |||  ||| || ||| ||||  ||| ||| 
Sbjct: 1438 tcaggagaaaaggctaagacagataccatcttctgtccgaaattagatgaagaactgaga 1497

                                                                        
Query: 232  aagaagaaggttgagtcttggtgcaaagctgttgaaaaatctttcggcttggccgatctt 291
            ||||| ||||| || |||||||||||||||||||||| | |||| |||||||| ||||||
Sbjct: 1498 aagaaaaaggtggaatcttggtgcaaagctgttgaaagaacttttggcttggctgatctt 1557

                  
Query: 292  tcaata 297
            ||||||
Sbjct: 1558 tcaata 1563