Jatropha Genome Database

JcCA0043871.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0043871.10 - phase: 0 
         (657 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011164 protein binding protein, putative                        96   3e-19

>30190.m011164 protein binding protein, putative
          Length = 978

 Score = 95.6 bits (48), Expect = 3e-19
 Identities = 144/176 (81%)
 Strand = Plus / Plus

                                                                       
Query: 307 tttataatatccgatataatttctctttttgcctcctcaacatcagtattgatgttctta 366
           ||||||||||| |||  ||| ||||| ||||| ||||||||||||||||||| ||| |||
Sbjct: 628 tttataatatctgatgcaatatctctctttgcgtcctcaacatcagtattgacgttttta 687

                                                                       
Query: 367 ggagtccttacatcgcgctattcagaagttgattttctcaaatctttgcctacaaagttg 426
           ||||| ||||| || |||||  | || |  ||||||||||| || || || ||||| |||
Sbjct: 688 ggagttcttacctctcgctacgcggaggaagattttctcaagtccttacccacaaaattg 747

                                                                   
Query: 427 attattggtctttctgctctcttcctttcaattgcaactatgatggcagccttttg 482
           ||||| | ||| ||  |||| ||| ||||||||||| | ||||||| |||||||||
Sbjct: 748 attatcgctctatccactcttttcgtttcaattgcagccatgatggtagccttttg 803