Jatropha Genome Database
- JcCA0043771.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0043771.10 + phase: 0
(1005 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29683.m000479 Rop guanine nucleotide exchange factor, putative 597 e-170
30170.m014310 Rop guanine nucleotide exchange factor, putative 100 3e-20
28934.m000056 Rop guanine nucleotide exchange factor, putative 70 3e-11
30174.m008604 Rop guanine nucleotide exchange factor, putative 60 3e-08
>29683.m000479 Rop guanine nucleotide exchange factor, putative
Length = 1743
Score = 597 bits (301), Expect = e-170
Identities = 592/689 (85%)
Strand = Plus / Plus
Query: 248 tcaagcctgagaaacgggaaacggatttgtctgaagtggaaatgatgaaagagagattcg 307
||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| |
Sbjct: 266 tcaagcctgagaaacgggacactgatttatctgaagtggaaatgatgaaagagagatttg 325
Query: 308 ctaagcttctgttgggagaggacatgtctggaggtggtaaaggagtatgtactgctcttg 367
||||||| || | |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 326 ctaagctacttctaggagaggacatgtctggaggtggtaaaggagtctgtactgctcttg 385
Query: 368 ctatttcaaatgctatcactaatctctctgcaaccgtgtttggtgagctgtggaggttag 427
| || || ||||| ||||||||||||||||| || || |||||||| || ||||||||||
Sbjct: 386 caatctccaatgccatcactaatctctctgctactgtatttggtgaactatggaggttag 445
Query: 428 agccattagccccacaaaagaagtcaatgtggcgcagagagatggagtggctcttatctg 487
|||||||||| |||||||||||||| |||||||| ||||| ||||| ||| | |||| ||
Sbjct: 446 agccattagctccacaaaagaagtccatgtggcggagagaaatggaatggttattatgtg 505
Query: 488 tgagtgattcaattgttgagcttgttccttcaatacaacaattccctggtgggggcacat 547
| ||||||||||||||||||||||||||||| | ||||||||||||||||| || || |
Sbjct: 506 tcagtgattcaattgttgagcttgttccttccgttcaacaattccctggtggaggtactt 565
Query: 548 atgaagtcatggtacctcgaccacggtcagatttatacatgaatctccctgccctgaaga 607
| || |||||| | ||| |||||| || |||||||| | ||||| |||||| ||||||
Sbjct: 566 acgagatcatggcagctcaaccacgctccgatttatatgtcaatctacctgccttgaaga 625
Query: 608 aacttgatgctatgttgattagtatgcttgatgggttttgtgacacggaattctggtatg 667
| |||||||| ||||||||||| |||||||||||||||||||| || || || |||||||
Sbjct: 626 agcttgatgccatgttgattagcatgcttgatgggttttgtgagaccgagttttggtatg 685
Query: 668 ttgatcgggggattatcttggctgatggtggtgattgcgatgtgtatccatcaagcattg 727
||||| ||||||| || |||||||||||| ||| ||||| ||||| || | ||
Sbjct: 686 ttgatagggggataattctggctgatggtgccgataatgatgtctatccttctgggtttt 745
Query: 728 caagtgcaaggccttcaattaggcaggaagagaagtggtggttgccatgcccaagagtac 787
| | || |||||||| ||||||||||||||||| ||||||||||| || || | | | |
Sbjct: 746 ctactgggaggccttccattaggcaggaagagaaatggtggttgccttgtcctaaactcc 805
Query: 788 catcgaatggattgtcagaggatgcaagaaagaggttgcagcaatgcagggattgcacaa 847
| || ||||| || || ||||||||||||||||| ||||||| |||||||| || ||||
Sbjct: 806 cctcaaatgggttatctgaggatgcaagaaagagactgcagcagtgcagggactgtacaa 865
Query: 848 accagatattaaaggcagcaatggcaattaatagtagtgtgcttgctgagatggagatac 907
|||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 866 accagatattgaaggcagctatggcaattaacagtagtgtgcttgctgagatggagatac 925
Query: 908 ctagtgcatacttggaaaccttacctaag 936
||| ||||||||||||||| || ||||||
Sbjct: 926 ctactgcatacttggaaactttgcctaag 954
Score = 75.8 bits (38), Expect = 5e-13
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 1 atggggagtgtgtcgtccgatgatggttctgatcagcaaagcgagagatgtgggagttac 60
||||| |||||||| || |||||||| |||| |||| |||||||||||||| || |||
Sbjct: 25 atgggaagtgtgtcatcggatgatgggggtgatgagcagagcgagagatgtggaagctac 84
Query: 61 agtttgagtgctgacgtcagcgagtcagagagttgtagtagc 102
||||||||||| || || |||||||| |||||| ||| ||||
Sbjct: 85 agtttgagtgcagatgtaagcgagtcggagagtagtactagc 126
>30170.m014310 Rop guanine nucleotide exchange factor, putative
Length = 1572
Score = 99.6 bits (50), Expect = 3e-20
Identities = 200/250 (80%)
Strand = Plus / Plus
Query: 272 atttgtctgaagtggaaatgatgaaagagagattcgctaagcttctgttgggagaggaca 331
|||| ||||| || ||||||||||| ||| |||| |||||||||||| | || || ||||
Sbjct: 248 atttatctgatgttgaaatgatgaaggagcgatttgctaagcttctgcttggcgaagaca 307
Query: 332 tgtctggaggtggtaaaggagtatgtactgctcttgctatttcaaatgctatcactaatc 391
|||| || || || || || || ||||| ||||| || || || ||||| || || |||
Sbjct: 308 tgtcaggcggaggaaagggcgtttgtacagctctcgccatctccaatgccattaccaatt 367
Query: 392 tctctgcaaccgtgtttggtgagctgtggaggttagagccattagccccacaaaagaagt 451
| ||||| | || ||||| ||||| ||| |||||||||| |||| || ||||| ||||
Sbjct: 368 tgtctgcttctgtctttggggagctacggaagttagagccactagcacctcaaaaaaagt 427
Query: 452 caatgtggcgcagagagatggagtggctcttatctgtgagtgattcaattgttgagcttg 511
||||||||| | | |||||||| | ||| |||| ||||||||||| || || |||||||
Sbjct: 428 caatgtggcaccgtgagatggatttgcttttatgcgtgagtgattctatagtagagcttg 487
Query: 512 ttccttcaat 521
||||||||||
Sbjct: 488 ttccttcaat 497
>28934.m000056 Rop guanine nucleotide exchange factor, putative
Length = 2022
Score = 69.9 bits (35), Expect = 3e-11
Identities = 89/107 (83%)
Strand = Plus / Plus
Query: 367 gctatttcaaatgctatcactaatctctctgcaaccgtgtttggtgagctgtggaggtta 426
||||||||||||||||| |||||||| | || ||| ||||||| | || |||||||||
Sbjct: 724 gctatttcaaatgctattactaatctatgcgctaccttgtttggccaactatggaggtta 783
Query: 427 gagccattagccccacaaaagaagtcaatgtggcgcagagagatgga 473
||||| ||| | ||| | ||||| |||||||||| |||||||||||
Sbjct: 784 gagcctttacctccagagaagaaagcaatgtggcgaagagagatgga 830
>30174.m008604 Rop guanine nucleotide exchange factor, putative
Length = 1416
Score = 60.0 bits (30), Expect = 3e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 289 atgatgaaagagagattcgctaagcttctgttgggagaggacatgtctggaggtggtaaa 348
|||||||||||||||||| | |||||| || | || || |||||||||||| ||||||||
Sbjct: 313 atgatgaaagagagattctcaaagcttttgcttggcgaagacatgtctggaagtggtaaa 372
Query: 349 gg 350
||
Sbjct: 373 gg 374