Jatropha Genome Database
- JcCA0042831.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0042831.10 - phase: 0 /pseudo
(1026 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28623.m000399 dfg10 protein, putative 226 2e-58
>28623.m000399 dfg10 protein, putative
Length = 1029
Score = 226 bits (114), Expect = 2e-58
Identities = 369/454 (81%)
Strand = Plus / Plus
Query: 382 tctgtgtttctgcttttattaatggaaatgcaagtcttgaggcgcctttatgagacagtt 441
|||||||| ||||| | || ||||| ||||| || || |||||||||||||||||||||
Sbjct: 400 tctgtgttcatgcttctgttgatggagatgcatgttttaaggcgcctttatgagacagtt 459
Query: 442 tatgtcttgaagtacagctcttcagctcgaatgcatatttttggctatctagtgggcctt 501
|||||| | |||||||| |||| ||||||||||| ||||||| |||||| || |||
Sbjct: 460 tatgtccttaagtacagtccttctgctcgaatgcacgtttttggttatctaacaggactt 519
Query: 502 ttcttctatacagtagcacctttgacactatgctactcatgtgcattcgaggcttttaac 561
||||||||||||| ||| ||||| |||| ||| ||| ||| ||| |||||| |||||
Sbjct: 520 ttcttctatacagcagcgcctttatcactttgccacttctgtatatttgaggctcttaac 579
Query: 562 tttgcagcatatcaaatgattgaggcgaatgttaaaaaccaacagacagtagctgtggat 621
|||||| ||||| | |||||| |||||| |||||| || ||| | || | ||
Sbjct: 580 gttgcagaatatcgagcaattgagatgaatgtaaaaaacgaagagatttcacctattgac 639
Query: 622 tttgattggtggagattagtgaagccttttgtcaagcttggttggtgccactgggttggt 681
|||||||||||| ||| ||| |||| | | ||||||||||||| || |||| ||||
Sbjct: 640 tttgattggtggggatatatgacgcctatcttacagcttggttggtgtcaatgggctggt 699
Query: 682 gctgctatatttgcttgggggtggttgcatcaactccgatgtcatgcaatcttgggctct 741
||||||||||||||||| |||||| ||||||| | ||||||||||||||||||||||||
Sbjct: 700 gctgctatatttgcttgcgggtgggtgcatcagcaacgatgtcatgcaatcttgggctct 759
Query: 742 ttgcgagaagatagagaacaaaatgaagaatatggaattcctcgtggtgattggtttgaa 801
||||| || | ||| |||| || |||||| |||||||| |||||||||||||||
Sbjct: 760 ctgcgaaaacaaagaagacaagtagatgaatatctaattcctcacggtgattggtttgaa 819
Query: 802 atagtttcaagtccacactacttggctgagatga 835
|| |||||||||||||||||||||||||||||||
Sbjct: 820 atggtttcaagtccacactacttggctgagatga 853
Score = 105 bits (53), Expect = 5e-22
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 16 gattggcttctacgagcagcatggatttctgcaactttacccatattaattgcttcattc 75
||||||||||| ||| ||| |||||| ||| |||||||||||||||| |||||||| ||
Sbjct: 16 gattggcttcttcgattagcgtggattgctggaactttacccatattacttgcttcactc 75
Query: 76 ccttcttctcgcctaaactctttccatcaacttcttttgggattttctagaaggggcaag 135
||||||||| | ||||||||||||||||||||| | |||||| ||| || ||||||
Sbjct: 76 ccttcttcttctttgaactctttccatcaacttcttctaggatttgctaagagaggcaag 135
Query: 136 actatgcaaccatcatc 152
| |||||||| ||||||
Sbjct: 136 attatgcaactatcatc 152