Jatropha Genome Database
- JcCA0042101.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0042101.10 + phase: 0
(1389 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30131.m007228 conserved hypothetical protein 569 e-161
>30131.m007228 conserved hypothetical protein
Length = 4479
Score = 569 bits (287), Expect = e-161
Identities = 512/587 (87%)
Strand = Plus / Plus
Query: 238 gatcctgagctggtgaagcaaatatacgagacggagttgaaggttaaggagggaagaaag 297
|||||||| |||| ||||| ||||| || ||||| ||||| || || || ||| |||||
Sbjct: 217 gatcctgatgtggttaagcagatatatgaaacggaattgaaagtgaaagaaggacgaaag 276
Query: 298 actgtgccattgcagagagtgatgattttggaggttagtcagtatttggagaactatctc 357
| ||||| || |||||||| ||||||||||| ||||| |||||||||||||| |||||
Sbjct: 277 ccagtgcctttacagagagtaatgattttggaagttagccagtatttggagaattatctg 336
Query: 358 tggccgaattttgacccggaaactgctacatttgagcatgttatgtccatgattctcatg 417
||||| |||||||| || ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 337 tggcctaattttgatcctgaaacggcgtcatttgagcatgttatgtccatgattctcatg 396
Query: 418 atcaacgagaagtttcgagaaaatgtggcagcttggttatgcttttatgatcggaaagac 477
||||| || ||||||||||| ||||| |||||||||||||||||||||||| |||||||
Sbjct: 397 atcaatgaaaagtttcgagagaatgttgcagcttggttatgcttttatgataggaaagat 456
Query: 478 gtcttcaagggattcttggagagggttcttcagctgaaggagggcagagagttgagtata 537
|| |||| ||||| ||||||||||||||| | || |||||||| |||||||||||||||
Sbjct: 457 gttttcagaggatttttggagagggttcttaaactcaaggaggggagagagttgagtata 516
Query: 538 tcagagaagacaaattacctagtttttatgattaatgccttccagagtttggaagatgaa 597
| ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 517 gcggagaagataaattacctagtgtttatgattaatgcctttcagagtttggaagatgaa 576
Query: 598 atcgtcagtgagacagtcctgaaattaggaagcttacagtcatggcactgtctatcatat 657
|| || || |||||||||||||| |||||| | ||||||||||||||| || | ||||||
Sbjct: 577 attgtgagcgagacagtcctgaagttaggaggtttacagtcatggcacagtttgtcatat 636
Query: 658 ggtcgatttcagatggagctttgtcttaatccagagttgatcaagaaatggaaaaggatg 717
||||||||||||||||||||||||||||| ||||| ||| | ||||||||||||||||||
Sbjct: 637 ggtcgatttcagatggagctttgtcttaacccagatttggttaagaaatggaaaaggatg 696
Query: 718 gtgaagagagagattaaggaggcgatgaaaggaggacaaccttttgatccttcaacttct 777
| |||| || |||||||||||||||| ||||| | |||||||| |||| |||| ||
Sbjct: 697 atcaagaaggaagctaaggaggcgatgaaacgaggagagccttttgaccctttaactgct 756
Query: 778 cttgaagtgaagttcttgagaaatctgattgaagagtttcttgatgt 824
||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 757 cttgaagtgaaattcttgagaaatcttgttgaagagtttcttgatgt 803
Score = 543 bits (274), Expect = e-154
Identities = 396/434 (91%), Gaps = 2/434 (0%)
Strand = Plus / Plus
Query: 882 tggttttgaggaagttgatgattcagcagtcttgtactgtgagaggttcatggaatttct 941
||||||||| |||||||| ||| | ||| || ||||||||||||||||||||||||||||
Sbjct: 870 tggttttgatgaagttgacgatgctgcaatcctgtactgtgagaggttcatggaatttct 929
Query: 942 cattgatctgttgagccaactgccaacaaggaggtacctgaggcctctcgtggctgatgt 1001
|||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 930 tattgatctgttgagccaactgccaactaggaggtacctaaggcctcttgtggctgatgt 989
Query: 1002 agctgttgttgcaaaatgccatttaagtgccctttacaaacatgaaaaagggaagctatt 1061
|||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||
Sbjct: 990 agctgttgttgcaaaatgccatttaagtgctctttacagacatgaaaaggggaagctatt 1049
Query: 1062 tgcacaactggttgacttactccagttctatgagaggtttgagatcaatgatcatagtgg 1121
||| ||| ||||||| ||||| ||||| ||||| || |||||||| ||||||||| ||||
Sbjct: 1050 tgcgcaattggttgatttactgcagttttatgaaagatttgagattaatgatcat-gtgg 1108
Query: 1122 g-acacaattgacagatgatgaagtgctccaatctcattatgatcgtttccaagctttcc 1180
| ||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||||||||
Sbjct: 1109 gaacacaattgactgatgatgaggtcctccagtctcactatgatcgttttcaagctttcc 1168
Query: 1181 agcttcttgcctttaagaagattcccaagttgcgagaacttgcattatctaatattggtg 1240
|||||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 1169 agcttcttgcatttaagacgatgcccaagttgcgagaacttgcattgtctaatattggtg 1228
Query: 1241 caattcacaagcgagctgatctctccaagaaattgtctgtgctctctcctgaagagttga 1300
||||| |||||||||||||||| |||||||||||||||||||| ||||| |||||||| |
Sbjct: 1229 caattaacaagcgagctgatctgtccaagaaattgtctgtgctatctccagaagagttaa 1288
Query: 1301 aggacttggtttgt 1314
||||||||||||||
Sbjct: 1289 aggacttggtttgt 1302