Jatropha Genome Database

JcCA0041501.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0041501.10 + phase: 0 
         (654 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30138.m003846 strictosidine synthase, putative                         78   7e-14

>30138.m003846 strictosidine synthase, putative
          Length = 1059

 Score = 77.8 bits (39), Expect = 7e-14
 Identities = 78/91 (85%)
 Strand = Plus / Plus

                                                                        
Query: 545  atggaaatggtggagagattcttgattctgttagtgaagttgcagaatatgatggagggt 604
            |||| |||||||| || | ||||||||||||||||||| |||  ||| |||||||| |||
Sbjct: 950  atggtaatggtggtgacactcttgattctgttagtgaaattgaggaacatgatggaaggt 1009

                                           
Query: 605  tgtggtttggatcttctgtgcaaccttatgt 635
            |||||||||| ||| ||  ||||||||||||
Sbjct: 1010 tgtggtttgggtctcctacgcaaccttatgt 1040



 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 158 cagacagaagtggaaggttattaaagtatgatccaaatagcaagaaagtgactgtgcttt 217
           ||||||| | ||||||||| || || ||||||| || || ||||||||||| ||| || |
Sbjct: 602 cagacaggactggaaggttgttgaaatatgatctaactaccaagaaagtgagtgtactgt 661

                                         
Query: 218 tcaaaggcttagcatttccaaatggggtgg 247
             |  ||||| |||||||||||||||||||
Sbjct: 662 ataggggcttggcatttccaaatggggtgg 691