Jatropha Genome Database
- JcCA0040611.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0040611.20 + phase: 0 /partial
(927 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29736.m002037 Protein kinase APK1B, chloroplast precursor, putative 371 e-102
29822.m003471 Protein kinase APK1B, chloroplast precursor, putative 305 3e-82
29927.m000593 Protein kinase APK1B, chloroplast precursor, putative 135 5e-31
30204.m001771 receptor serine-threonine protein kinase, putative 78 1e-13
28842.m000933 Protein kinase APK1B, chloroplast precursor, putative 70 3e-11
27887.m000072 Protein kinase APK1B, chloroplast precursor, putative 62 6e-09
30073.m002199 Protein kinase APK1B, chloroplast precursor, putative 56 4e-07
>29736.m002037 Protein kinase APK1B, chloroplast precursor, putative
Length = 1488
Score = 371 bits (187), Expect = e-102
Identities = 483/584 (82%)
Strand = Plus / Plus
Query: 337 tttaatgagcttaagtcagcaacaagaaattttaggcctgagaatcttcttggtgagggt 396
|||||||| ||||||| |||||||||||||| || ||||||| ||||||||| || |||
Sbjct: 385 tttaatgatcttaagttggcaacaagaaatttcagacctgagagtcttcttggcgaaggt 444
Query: 397 gggtttggatgtgtgttcaaaggatggattagcgagactaggactgcttcagttaaacct 456
|| ||||| |||||||||||||| |||||| |||| | | |||||| | || |||||
Sbjct: 445 ggttttggttgtgtgttcaaagggtggattgaagagaatggaactgctccggtgaaaccc 504
Query: 457 gggacaggtctgcctgttgcagtnnnnnnncacaaccatggtggacttcagggtcataaa 516
|| ||||| || ||||||| || | || |||| ||| ||||||||||| |||
Sbjct: 505 ggtacagggcttactgttgctgttaaaacccttaatcatgatgggcttcagggtcacaaa 564
Query: 517 gaatggcttgctgaagttaattatcttggtgctcttcaccatcctcacttggttaagtta 576
|| ||| | || ||||| |||||| | |||| |||| |||||| ||||||||||| |
Sbjct: 565 gagtggttggccgaagtgaattatttgggtgatcttgttcatcctaacttggttaagctg 624
Query: 577 attgggtattgcattgaagatgatcaaaggctgcttgtttatgagttcatgcctcgagga 636
|| || || ||||||||||||||||||||||| || || |||||||| ||||||||||||
Sbjct: 625 atcggttactgcattgaagatgatcaaaggctactagtatatgagtttatgcctcgagga 684
Query: 637 agcttggagaatcacctctttaggaggtctctgcctcttccctggtccatcagaattaaa 696
||||||||||| ||||| ||||| || |||||||||||||| |||||||| || || |||
Sbjct: 685 agcttggagaaccacctatttagaagatctctgcctcttccatggtccataaggatgaaa 744
Query: 697 attgcacttggtgctgcacaaggccttgcctttcttcatgaggaagctgaacatccagtg 756
||||| || ||||||||| | || ||||||||||||||||| ||||| || |||||
Sbjct: 745 attgcgctaggtgctgcaaagggtcttgcctttcttcatgaagaagcagagaggccagtc 804
Query: 757 atataccgagattttaaaacatctaatatcctgctagatgcagattacaatgccaagctt 816
||||| || ||||||||||| ||||||||||| ||||||| ||||| ||||||||||||
Sbjct: 805 atatatcgtgattttaaaacctctaatatcctattagatgcggattataatgccaagctt 864
Query: 817 tctgattttggccttgccaaggatggtcctgaaggagacaagactcatgtttctactcgt 876
||||||||||| || ||||| || |||||||| ||||| ||||| ||||| ||||||||
Sbjct: 865 tctgattttggactcgccaaagacggtcctgagggagataagacccatgtatctactcgc 924
Query: 877 gtgatgggaacatatggttatgcagctccagagtatgtaatgac 920
||||||||||||||||| |||||||| || || ||||| |||||
Sbjct: 925 gtgatgggaacatatggctatgcagcccctgaatatgtgatgac 968
>29822.m003471 Protein kinase APK1B, chloroplast precursor, putative
Length = 1440
Score = 305 bits (154), Expect = 3e-82
Identities = 464/569 (81%), Gaps = 3/569 (0%)
Strand = Plus / Plus
Query: 355 gcaacaagaaattttaggcctgagaatcttcttggtgagggtgggtttggatgtgtgttc 414
||||| || ||||| |||||||||| ||||||||| |||||||| ||||| ||||| |||
Sbjct: 352 gcaactaggaatttcaggcctgagagtcttcttggggagggtggttttggttgtgtcttc 411
Query: 415 aaaggatggattagcgagactaggactgcttcagttaaacctgggacaggtctgcctgtt 474
||||| ||||| |||| | | |||||| |||| |||||||| ||||| || |||||
Sbjct: 412 aaaggttggatagaggagaatggaactgctccagtgaaacctggcacagggcttactgtt 471
Query: 475 gcagtnnnnnnncacaaccatggtggacttcagggtcataaagaatggcttgctgaagtt 534
|| || | |||||| | |||||||||||||||||| || |||||||||||||||
Sbjct: 472 gctgtgaaaacactcaaccacgatggacttcagggtcataaggagtggcttgctgaagtt 531
Query: 535 aattatcttggtgctcttcaccatcctcacttggttaagttaattgggtattgcattgaa 594
| || ||| || ||||| ||||| | |||||||| || ||||| ||||| ||||||
Sbjct: 532 agttttctgggaaatcttctgcatcccaatttggttaaattgattggttattgtattgaa 591
Query: 595 gatgatcaaaggctgcttgtttatgagttcatgcctcgaggaagcttggagaatcacctc 654
|||||||| ||| |||| || |||||||| ||||| ||||||||||||||||||||||
Sbjct: 592 gatgatcagaggttgctcgtatatgagtttatgccaagaggaagcttggagaatcacctt 651
Query: 655 tttagga---ggtctctgcctcttccctggtccatcagaattaaaattgcacttggtgct 711
|| || | |||| |||||||||| ||||| || ||||| || ||||||||||||||
Sbjct: 652 ttcagaaaagggtccttgcctcttccatggtctattagaatgaagattgcacttggtgcc 711
Query: 712 gcacaaggccttgcctttcttcatgaggaagctgaacatccagtgatataccgagatttt 771
||| | || ||||||||||||||||| || |||||| |||||||||| || ||||||
Sbjct: 712 gcaaagggtcttgcctttcttcatgaagaggctgaaagatcagtgatatatcgtgatttt 771
Query: 772 aaaacatctaatatcctgctagatgcagattacaatgccaagctttctgattttggcctt 831
|||||||| |||||| | ||||||| |||||||||||||| || ||||||||||| ||
Sbjct: 772 aaaacatcaaatatcttattagatgcggattacaatgccaaactctctgattttggactg 831
Query: 832 gccaaggatggtcctgaaggagacaagactcatgtttctactcgtgtgatgggaacatat 891
||||| ||||||||||| | | || ||||| || |||||||| || ||||||||||||
Sbjct: 832 gccaaagatggtcctgagagtggtaaaactcacgtatctactcgagtaatgggaacatat 891
Query: 892 ggttatgcagctccagagtatgtaatgac 920
|| ||||| |||||||||||||| |||||
Sbjct: 892 ggctatgctgctccagagtatgtgatgac 920
>29927.m000593 Protein kinase APK1B, chloroplast precursor, putative
Length = 1326
Score = 135 bits (68), Expect = 5e-31
Identities = 298/374 (79%), Gaps = 3/374 (0%)
Strand = Plus / Plus
Query: 550 cttcaccatcctcacttggttaagttaattgggtattgcattgaagatgatcaaaggctg 609
|||||||||||| || | |||||| | |||||||| |||||||| ||||||||| |||||
Sbjct: 502 cttcaccatcctaaccttgttaagcttattgggtactgcattgaggatgatcaacggctg 561
Query: 610 cttgtttatgagttcatgcctcgaggaagcttggagaatcacctctttaggaggtctctg 669
||||||||||| |||||| | || ||||| | || ||||| || ||||| ||| | |
Sbjct: 562 cttgtttatgaattcatgacacgtggaagtcttgaaaatcatctatttagaaggacaata 621
Query: 670 cctcttccctggtccatcagaattaaaattgcacttggtgctgcacaaggccttgccttt 729
||||| || ||||||| ||| ||||| ||||||||||| || ||| |||| | ||||||
Sbjct: 622 cctctcccatggtccaacaggattaagattgcacttggggcagcaaaaggattagccttt 681
Query: 730 cttcatgaggaagctgaacatccagtgatataccgagattttaaaacatctaatatcctg 789
||||||| | | ||| ||||| || ||| |||||||||| || || || ||| ||
Sbjct: 682 cttcatggtggtccagaa---ccagttatctacagagattttaagacttcaaacatcttg 738
Query: 790 ctagatgcagattacaatgccaagctttctgattttggccttgccaaggatggtcctgaa 849
|| ||| |||| || ||||| |||||||| |||||||| || || |||| ||| ||| ||
Sbjct: 739 cttgattcagaatataatgcaaagctttcagattttggtctagcaaaggctgggcctcaa 798
Query: 850 ggagacaagactcatgtttctactcgtgtgatgggaacatatggttatgcagctccagag 909
|| ||||| |||||||||||||| | || | ||||||||||| ||||| ||||| ||
Sbjct: 799 ggtgacaaaactcatgtttctaccagggttgttggaacatatggctatgctgctccggaa 858
Query: 910 tatgtaatgacagg 923
||||| ||||||||
Sbjct: 859 tatgtgatgacagg 872
>30204.m001771 receptor serine-threonine protein kinase, putative
Length = 1344
Score = 77.8 bits (39), Expect = 1e-13
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 802 tacaatgccaagctttctgattttggccttgccaaggatggtcctgaaggagacaagact 861
|||||||| ||||| ||||||||||| || |||||| ||| |||| ||| |||| ||||
Sbjct: 733 tacaatgcaaagctctctgattttgggctagccaagcttggacctgtaggggacaggact 792
Query: 862 catgtttctactcgtgtgatgggaacatatggtta 896
||||||||| | | ||||||||||||||||||||
Sbjct: 793 catgtttcttcaagagtgatgggaacatatggtta 827
>28842.m000933 Protein kinase APK1B, chloroplast precursor, putative
Length = 1158
Score = 69.9 bits (35), Expect = 3e-11
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 805 aatgccaagctttctgattttggccttgccaaggatggtcctgaaggagacaagactcat 864
||||||||||| ||||| ||||| ||||| || ||||| ||| |||||||| ||||||
Sbjct: 652 aatgccaagctgtctgactttggtcttgcaaaagatggacctatgggagacaaaactcat 711
Query: 865 gtttctactcgtgtgatgggaacatatggttatgcagctccagagtatgtaatgacagg 923
|||||||| ||| | |||||||| || || |||||||| || || || ||||||||||
Sbjct: 712 gtttctacacgtataatgggaacttacggctatgcagcacctgaatacataatgacagg 770
>27887.m000072 Protein kinase APK1B, chloroplast precursor, putative
Length = 1170
Score = 61.9 bits (31), Expect = 6e-09
Identities = 109/135 (80%)
Strand = Plus / Plus
Query: 778 tctaatatcctgctagatgcagattacaatgccaagctttctgattttggccttgccaag 837
|||||||| ||||| ||| || | |||||||| |||||||||||||||||| | |||| |
Sbjct: 628 tctaatattctgcttgattcaaaatacaatgcgaagctttctgattttggcttggccagg 687
Query: 838 gatggtcctgaaggagacaagactcatgtttctactcgtgtgatgggaacatatggttat 897
||||| || || || || | |||||| |||||| | || |||||||| ||||| |||
Sbjct: 688 gatggaccaaccggtgataaaagtcatgtctctactagggtcatgggaacttatggatat 747
Query: 898 gcagctccagagtat 912
|| || |||||||||
Sbjct: 748 gccgcaccagagtat 762
>30073.m002199 Protein kinase APK1B, chloroplast precursor, putative
Length = 1605
Score = 56.0 bits (28), Expect = 4e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 610 cttgtttatgagttcatgcctcgaggaagcttggagaatcacctcttt 657
|||||||||||||||||| ||||||||| | |||||||||||||||
Sbjct: 487 cttgtttatgagttcatgttccgaggaagccttgagaatcacctcttt 534