Jatropha Genome Database
- JcCA0040601.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0040601.10 - phase: 2 /pseudo/partial
(769 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30129.m000356 WD-repeat protein, putative 509 e-144
>30129.m000356 WD-repeat protein, putative
Length = 1344
Score = 509 bits (257), Expect = e-144
Identities = 642/769 (83%), Gaps = 1/769 (0%)
Strand = Plus / Plus
Query: 1 cggcggcggtggtatcggagttgtcgaaatgcttttccgttgtaacattttggctctcgt 60
||||||||| || ||||| || || || ||||| || |||||||| || || ||||| ||
Sbjct: 405 cggcggcggcggaatcggtgtcgtagagatgctatttcgttgtaatatattagctcttgt 464
Query: 61 tggtggtggttccgatcctcagtatccgccaaacaaagtcatgatctgggacgatcacca 120
||| ||||| || || ||||||||||| || || || || ||||| ||||| ||||| ||
Sbjct: 465 tggcggtggctcagaccctcagtatcctcctaataaggtgatgatttgggatgatcatca 524
Query: 121 gagtcgctgcatcggagagctgtcgttcaggtctgaggttcgatcagtgaagcttagacg 180
|| | |||||||| |||||||| || ||||| ||||| |||| |||||||| ||| |
Sbjct: 525 aagcagatgcatcggcgagctgtcatttaggtcagaggtcagatcggtgaagctaagaag 584
Query: 181 ggatagaatcattgtggtgctggagcagaaaatttttgtgtataatttcgcagatttgaa 240
||| || || || ||||| || || ||||| |||||||||||||||||||| ||||| ||
Sbjct: 585 ggacaggattatcgtggttcttgaacagaagatttttgtgtataatttcgcggatttaaa 644
Query: 241 actgttgcatcagattgagacaattgcaaatcccaaaggactctgtgcagtgtcgcaggg 300
|| ||||| |||||||||||||||||||| || ||||| ||||||||||||||||| ||
Sbjct: 645 gcttttgcaccagattgagacaattgcaaaccctaaagggctctgtgcagtgtcgcatgg 704
Query: 301 ggcgggttcattggtaatggtttgtccaggattgcagaagggccaagttagggtagagca 360
|||||||| ||||| |||| ||||| ||||| || ||||| ||||||||||| |||||
Sbjct: 705 tgcgggttctttggttttggtgtgtcctggattacaaaagggtcaagttagggttgagca 764
Query: 361 ttatgcgtccaaacgaactaaatttattatggctcatgattcgaggatcgcttgctttgc 420
|||||| || ||||| ||||| |||||||||||||||||||| ||||| ||||| |||||
Sbjct: 765 ttatgcctcgaaacggactaagtttattatggctcatgattccaggattgcttgttttgc 824
Query: 421 tctcacgcaggatgggcagttgctggcaaccgctagcacgaaaggaactctggttcggat 480
||| || |||||||| |||||| |||| || |||||||| ||||| ||||| ||| || |
Sbjct: 825 tcttactcaggatggccagttgttggctacggctagcaccaaaggtactcttgttagggt 884
Query: 481 tttcaacacagctgatggcaccctgctccaagaggtaagaagaggtgcagatagagcaga 540
||| ||||| |||||||| || |||| || |||||||| || |||||||||||||||||
Sbjct: 885 ttttaacactgctgatggttccttgctgcaggaggtaaggaggggtgcagatagagcaga 944
Query: 541 aatttatagtttggctttctcttccaccgcccagtggctggcagtgtcaagcgacaaggg 600
||| |||||| |||| |||||||| || ||||||||| | ||||| ||||| ||||||||
Sbjct: 945 aatatatagtgtggcattctcttcaactgcccagtggttagcagtctcaagtgacaaggg 1004
Query: 601 cactgtccatgttttcagccttaagattaatccaggatccccagggactgataagtcagg 660
|||||| ||||||||||||||||||| || ||| ||||||| ||||||||||| |||| |
Sbjct: 1005 cactgttcatgttttcagccttaagactactcctggatccctagggactgataggtcacg 1064
Query: 661 aaacacaaccgatcccaacaatgctgtcacatccccaacctcatctctctcgttttttaa 720
|||||||||||||| || || ||| | || || ||||||||| | || || |||||
Sbjct: 1065 taacacaaccgatcctaatgttggtgtttcgtctcccacctcatctttatccttctttaa 1124
Query: 721 aggtgttttgccctaagtatttcagctcagagtggtcagtggctcagtt 769
||| ||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 1125 aggggtttt-accaaagtatttcagctcagagtggtcagtagctcagtt 1172