Jatropha Genome Database
- JcCA0032471.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0032471.10 - phase: 1 /partial
(1194 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013868 DNA binding protein, putative 396 e-109
29801.m003176 DNA binding protein, putative 84 2e-15
>30170.m013868 DNA binding protein, putative
Length = 1269
Score = 396 bits (200), Expect = e-109
Identities = 326/368 (88%)
Strand = Plus / Plus
Query: 740 aatatttcctaagcagcctactttgggatatgtgacacagatgcctctgcagactagtcc 799
|||||| || |||||||||| ||||||||||||||||||| ||||| |||| | ||||||
Sbjct: 729 aatattcccaaagcagcctaatttgggatatgtgacacaggtgcctttgcaaaatagtcc 788
Query: 800 tggaattaggagtggaatcatgggaattggagatcaggcgcttggtggtggtttgatgca 859
|||||||||| ||||||| ||||| ||||| ||||||| | || ||||||| |||||||
Sbjct: 789 tggaattaggggtggaataatggggattggggatcaggggattaatggtggtctgatgca 848
Query: 860 gggtggaggtttgggaatggttggattaggaggtgtggcgacaggatcacctgcaaacca 919
||||||||| |||||||| |||||||||||||||| || ||||||||||||||||||||
Sbjct: 849 gggtggagggatgggaatgattggattaggaggtgttgcaacaggatcacctgcaaacca 908
Query: 920 gctatcctcggatgggatcacaaagagcaacggtgatacttcttcagtatcaccagttcc 979
||| ||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||
Sbjct: 909 gctgtcctctgatgggattacaaagagtaatggtgatacatcttcagtgtcaccagttcc 968
Query: 980 ctatgtctttaatggaggtttacgaggaagaagagcaactggtgctgtggagaaggtggt 1039
||||| |||||||||||||| |||| || ||||| |||||||||||||||||||||
Sbjct: 969 ttatgtatttaatggaggtttgagagggaggagagctggtggtgctgtggagaaggtggt 1028
Query: 1040 tgaaaggaggcagagaagaatgattaagaacagagagtcagctgcaagatcacgggctcg 1099
||| |||||||||||||||||||| |||||| | ||||| ||||||||||||||||||||
Sbjct: 1029 tgagaggaggcagagaagaatgatcaagaaccgggagtcggctgcaagatcacgggctcg 1088
Query: 1100 caagcagg 1107
||||||||
Sbjct: 1089 caagcagg 1096
Score = 226 bits (114), Expect = 2e-58
Identities = 395/489 (80%), Gaps = 6/489 (1%)
Strand = Plus / Plus
Query: 144 tcgatctattccttgacctttgatgagttacagagtaccatggggggaataggaaaggat 203
||||||||||| || || ||||||||||| || || | ||||| |||||||||||||||
Sbjct: 103 tcgatctattcattaacatttgatgagtttcaaagcagtatgggaggaataggaaaggat 162
Query: 204 tttggatcaatgaatatggatgagctacttaaaaacatatggactgcagaggagacacag 263
||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 163 tttgggtcaatgaacatggatgagctgcttaaaaacatatggactgcagaggagacacat 222
Query: 264 aatatggtagccgcctctactgggcc------tcaagagagtctgcagcgccagggctcg 317
||||||||||| | | || ||| | |||||| | ||||||| ||||| ||
Sbjct: 223 aatatggtagcatcgtgtagtggaacccaaggccaagagggattgcagcggcaggggtct 282
Query: 318 ttgacacttcctcgaactcttagccaaaagacagtggatgaagtgtggaaagacatctca 377
|| || || || ||||| | ||||| ||||| || || || |||||||||||||| |||
Sbjct: 283 ttaaccctgccacgaacattgagccagaagacggttgacgaggtgtggaaagacatatca 342
Query: 378 aaggaatatgtgaatgggggtggcactggaggtggagtagctaatgtgccccagaggcag 437
||||| || | ||||| || | |||||| | |||| | ||| | ||||| ||||||
Sbjct: 343 aaggagtacggaaatggaaatgcaaatggaggcgtagtaacgaatttaccccaaaggcag 402
Query: 438 cagactttgggagagatgactctagaggagtttttggtgagagctggggtggtgagagaa 497
||||||||||| || ||||| ||||||| ||||||||||||||||| || || ||||||
Sbjct: 403 cagactttgggggaaatgacattagaggaatttttggtgagagctggtgttgtaagagaa 462
Query: 498 gatgctcaaatagctgggaaaattaatgctaatggtggtttttatggtgatctggcaagg 557
||||||||| |||||| || ||||| ||||||||||||| | ||||||| | |||||
Sbjct: 463 gatgctcaattagctgccaaggttaatactaatggtggtttctttggtgatttctcaagg 522
Query: 558 tcagggaataattctggttttggacttgggtttcagcagaatagggttctggcattaaac 617
|||||||||||| || ||| ||| ||||||||||||| ||||| ||| ||| ||| ||
Sbjct: 523 tcagggaataatgcttctttaggaattgggtttcagcaaaatagagttttgggattgaat 582
Query: 618 agtaataat 626
| |||||||
Sbjct: 583 attaataat 591
>29801.m003176 DNA binding protein, putative
Length = 1302
Score = 83.8 bits (42), Expect = 2e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 198 aaggattttggatcaatgaatatggatgagctacttaaaaacatatggactgcagaggag 257
|||||||| ||||||||||||||||| |||||||| ||||||||||||||||| || |||
Sbjct: 157 aaggatttaggatcaatgaatatggacgagctactgaaaaacatatggactgctgaagag 216
Query: 258 ac 259
||
Sbjct: 217 ac 218