Jatropha Genome Database
- JcCA0029841.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0029841.30 + phase: 0 /partial
(1084 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29727.m000492 nucleolysin tia-1, putative 1402 0.0
29739.m003726 nucleolysin tia-1, putative 432 e-120
28226.m000878 nucleolysin tia-1, putative 96 5e-19
>29727.m000492 nucleolysin tia-1, putative
Length = 1269
Score = 1402 bits (707), Expect = 0.0
Identities = 992/1085 (91%), Gaps = 4/1085 (0%)
Strand = Plus / Plus
Query: 1 atgcagcaccagaggcttaaacagcagcagcaagctctgatgcaacaagctcttcttcaa 60
||||| ||||||||||| || |||||||| |||||| |||||||||||||||||||||||
Sbjct: 1 atgcaacaccagaggctaaagcagcagcaacaagctttgatgcaacaagctcttcttcaa 60
Query: 61 caacagtctctctatcatccagctggtcttctcgctcctcctcagattgagccaattccc 120
||||||||||| ||||| || ||| |||||||||||||||||||||||||||||||||
Sbjct: 61 caacagtctctttatcaccc---tggccttctcgctcctcctcagattgagccaattccc 117
Query: 121 agtggaaatctgcctcctggttttgatccaagcacttgccgcagtgtgtatgttggaaat 180
|| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 118 agcggaaatctgcctcctggttttgatcctagcacttgccgcagtgtgtatgtgggaaat 177
Query: 181 atccatacacaggtgactgaacctcttcttcaagaagttttttcaagtactggtcttgtt 240
|| || |||||||| |||||||| ||||| |||||||| ||| |||||||||||| ||||
Sbjct: 178 attcacacacaggtaactgaaccacttctccaagaagtatttgcaagtactggtcctgtt 237
Query: 241 gagggctgtaaacttattagaaaggaaaagtcgtcctatggatttattcactactatgat 300
|| ||||||| |||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 238 gaaagctgtaagcttattagaaaggaaaagtcttcctatggatttattcactacttcgat 297
Query: 301 cgtagatcagctgctcttgctatattatctcttaatggaaggcatctatttgggcagcca 360
|| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cgccgatcggctgctcttgccatattatctcttaatggaaggcatctatttgggcagcct 357
Query: 361 atcaaagttaattgggcatatgctagtggtcagcgagaagatacatcaggtcacttcaac 420
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 358 ataaaagttaattgggcatatgctagtggtcagcgggaagatacatcaggtcactacaac 417
Query: 421 atttttgttggagatcttagtcctgaggttactgatgcaacactgtttgcctgcttttca 480
|||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 418 atttttgtaggagatcttagtccggaagttactgatgcaacactttttgcctgcttttca 477
Query: 481 gtttatcccagttgttcagatgcaagggttatgtgggatcagaagactgggcgttcaaga 540
||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 478 gtttatcatagttgttcagacgcaagggttatgtgggatcagaagactggccgttcaaga 537
Query: 541 ggttttggatttgtttctttcagaaatcaacaggatgcccaaagtgcaataaatgactta 600
|||||||| || ||||||||| ||||||||||||||||||||||||| || |||||||||
Sbjct: 538 ggttttgggttcgtttctttccgaaatcaacaggatgcccaaagtgcgattaatgactta 597
Query: 601 acaggtaagtggcttgggagcagacagattcgttgtaattgggccacaaaaggcgctggt 660
||||| |||||||||||||| ||||||||||||||||| |||||||||||||| |||
Sbjct: 598 acagggaagtggcttgggagtagacagattcgttgtaactgggccacaaaaggagctacc 657
Query: 661 tccaatgatgacaaacaaagctctgattcaaaaagtgtggtggaactaacaaatggcaca 720
||||||||||||||||||||||||||| | |||||||| |||||||||||||||||| ||
Sbjct: 658 tccaatgatgacaaacaaagctctgatgccaaaagtgtagtggaactaacaaatggctca 717
Query: 721 tcagaagagggcaaagacacggccactaatgaggctcctgaaaacaatcctcagtataca 780
||||||||||| ||||| || |||| ||||| |||||||||||||||||||||||||||
Sbjct: 718 tcagaagagggaaaagagacagccaacaatgatgctcctgaaaacaatcctcagtataca 777
Query: 781 actgtttatgtgggaaatcttgctccagaggttacgcagcttgatctccatcgccacttc 840
||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 778 actgtttatgtgggaaatcttgctccagaggttacacagcttgatcttcaccgccacttc 837
Query: 841 catgctcttggtgctggagttattgaggaggtccgggttcagcgggataaaggatttggt 900
||| |||||||||||||||||||||||||||| || || ||||||||||||||||| ||
Sbjct: 838 cattctcttggtgctggagttattgaggaggttcgagtccagcgggataaaggattcggg 897
Query: 901 ttcgtgagatacagtactcatgctgaggctgctctagcaattcagatgggaaatacccag 960
|| ||||||| |||||||||||||||||| |||||||| ||||| |||||||| || ||
Sbjct: 898 tttgtgagattcagtactcatgctgaggcagctctagctattcaaatgggaaacacacaa 957
Query: 961 tcaattctttgtggcaaacaaataaagtgctcttggggtagcaagcccactccaccaggg 1020
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 tcaattctttatggcaaacaaataaagtgctcttggggtagcaagcccactccaccaggg 1017
Query: 1021 acgagttcaaatccgcttccaccgcctgcagctgcacttttg-caggcctctctgctact 1079
|| |||||||| || ||||| || ||||||||||||| |||| |||||||||| || |||
Sbjct: 1018 acaagttcaaacccacttcccccccctgcagctgcacctttgccaggcctctcggccact 1077
Query: 1080 gacct 1084
|||||
Sbjct: 1078 gacct 1082
>29739.m003726 nucleolysin tia-1, putative
Length = 1077
Score = 432 bits (218), Expect = e-120
Identities = 731/899 (81%), Gaps = 6/899 (0%)
Strand = Plus / Plus
Query: 121 agtggaaatctgcctcctggttttgatccaagcacttgccgcagtgtgtatgttggaaat 180
||||||||||||||||||||||||||| ||| || ||||| ||||| || || ||||||
Sbjct: 91 agtggaaatctgcctcctggttttgattcaactacatgccgaagtgtatacgtaggaaat 150
Query: 181 atccatacacaggtgactgaacctcttcttcaagaagttttttcaagtactggtcttgtt 240
||||| | ||||| || ||||| ||||||||||| ||||| |||| ||||| || ||
Sbjct: 151 atccaccctcaggttacagaaccccttcttcaagaggttttctcaaacactggactcatt 210
Query: 241 gagggctgtaaacttattagaaaggaaaagtcgtcctatggatttattcactactatgat 300
|| || |||||||| ||||| || || ||||| |||||||| ||| || | |||| ||||
Sbjct: 211 gaaggatgtaaactgattaggaaagagaagtcatcctatggttttgttgattactttgat 270
Query: 301 cgtagatcagctgctcttgctatattatctcttaatggaaggcatctatttgggcagcca 360
|| ||||||||||||||| | || | | ||||||||||| ||||| ||||| || ||
Sbjct: 271 cgcagatcagctgctctttccattgtgacccttaatggaagacatctgtttggacaacct 330
Query: 361 atcaaagttaattgggcatatgctagtggtcagcgagaagatacatcaggtcacttcaac 420
|| ||||| |||||||| ||||||||| |||| |||||||||||||||| || |||||
Sbjct: 331 attaaagtgaattgggcctatgctagtagtcaaagagaagatacatcaggccatttcaat 390
Query: 421 atttttgttggagatcttagtcctgaggttactgatgcaacactgtttgcctgcttttca 480
||||||||||| |||||||| || || ||||| ||||| ||| ||| ||| | || |
Sbjct: 391 atttttgttggtgatcttagcccagaagttacagatgctacattgtatgcaagtttcgct 450
Query: 481 gtttatcccagttgttcagatgcaagggttatgtgggatcagaagactgggcgttcaaga 540
| | ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 451 ttgtttcctagttgttcagatgcaagggttatgtgggaccagaagactgggcgctcaagg 510
Query: 541 ggttttggatttgtttctttcagaaatcaacaggatgcccaaagtgcaataaatgactta 600
|||||||| |||||||||||||| ||||| |||||||| || | |||||||||||| |||
Sbjct: 511 ggttttgggtttgtttctttcaggaatcagcaggatgctcagaatgcaataaatgaatta 570
Query: 601 acaggtaagtggcttgggagcagacagattcgttgtaattgggccacaaaaggcgctggt 660
| || || ||| |||| ||| |||| ||||| ||||| ||||| ||||||| ||
Sbjct: 571 aatgggaaatggattggaagccgacaaattcggtgtaactgggctgcaaaaggtactaca 630
Query: 661 tccaatgatgacaaacaaagctctgattcaaaaagtgtggtggaactaacaaatggcaca 720
|| ||||||||||| || || |||||| | ||||||||||| || ||||||||||| |||
Sbjct: 631 tcaaatgatgacaagcagagttctgatgccaaaagtgtggtagagctaacaaatggaaca 690
Query: 721 tcagaagagggcaaagacacggccactaatgaggctcctgaaaacaatcctcagtataca 780
|||||||| || |||| | | | | |||| || || ||||||||||||||||||||
Sbjct: 691 tcagaagacagccaagaaaag---aatgatgatgcgccagaaaacaatcctcagtatacc 747
Query: 781 actgtttatgtgggaaatcttgctccagaggttacgcagcttgatctccatcgccacttc 840
||||| ||||| || ||||||||||| |||||||| | ||||||||||| || |||
Sbjct: 748 actgtatatgttggcaatcttgctcctgaggttacttctgtggatctccatcggcatttc 807
Query: 841 catgctcttggtgctggagttattgaggaggtccgggttcagcgggataaaggatttggt 900
||| ||||||||||| ||| ||||| || ||||| || || |||||||| ||||||
Sbjct: 808 tatggacttggtgctgggactatagaggatgtgcgggtgcaacgcgataaaggttttggt 867
Query: 901 ttcgtgagatacagtactcatgctgaggctgctctagcaattcagatgggaaatacccag 960
||||| ||||| || || |||||||| ||||| || || ||||||||||||||| | | |
Sbjct: 868 ttcgtaagatatagcacgcatgctgaagctgcccttgctattcagatgggaaatgctc-g 926
Query: 961 tcaattctttgtggcaaacaaataaagtgctcttggggtagcaagcccactccaccagg 1019
| ||||| | |||||||| | ||||||| || ||||||||||| ||||||||||||||
Sbjct: 927 t--attctatatggcaaaccagtaaagtgttcatggggtagcaaacccactccaccagg 983
>28226.m000878 nucleolysin tia-1, putative
Length = 1254
Score = 95.6 bits (48), Expect = 5e-19
Identities = 177/220 (80%)
Strand = Plus / Plus
Query: 400 gatacatcaggtcacttcaacatttttgttggagatcttagtcctgaggttactgatgca 459
||||||||||| || ||| | ||||||||||| ||| | || ||||||||||||||||||
Sbjct: 355 gatacatcagggcatttccatatttttgttggtgatttgagccctgaggttactgatgca 414
Query: 460 acactgtttgcctgcttttcagtttatcccagttgttcagatgcaagggttatgtgggat 519
|| | ||||| || |||||||| ||| || || || |||||||||||||||||||||
Sbjct: 415 actttatttgcatgtttttcagtctataatagctgctctgatgcaagggttatgtgggat 474
Query: 520 cagaagactgggcgttcaagaggttttggatttgtttctttcagaaatcaacaggatgcc 579
|| || ||||| || || | ||| | ||| |||||||||||| | ||||| | ||| ||
Sbjct: 475 cacaaaactggccgctcgaaaggatatggctttgtttctttccgcaatcagcgggaagca 534
Query: 580 caaagtgcaataaatgacttaacaggtaagtggcttggga 619
|| ||||| || ||||| || | ||||| ||||||||||
Sbjct: 535 cagagtgctatcaatgatttgagcggtaaatggcttggga 574
Score = 61.9 bits (31), Expect = 7e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 101 ctcagattgagccaattcccagtggaaatctgcctcctggttttgat 147
||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 56 ctcagatggagccaatacctagtggaaatttgcctcctggttttgat 102