Jatropha Genome Database
- JcCA0029841.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0029841.10 - phase: 2 /pseudo/partial
(2110 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29158.m000199 Serine/threonine-protein kinase PBS1, putative 115 1e-24
>29158.m000199 Serine/threonine-protein kinase PBS1, putative
Length = 2109
Score = 115 bits (58), Expect = 1e-24
Identities = 328/419 (78%), Gaps = 6/419 (1%)
Strand = Plus / Plus
Query: 221 ttcgtcttgagaaaatgggtttatcaggaaatattgatattgaagcgttgagtaatatga 280
||||||||||||||||||| ||||||||||| |||||| |||| || |||| | ||||
Sbjct: 221 ttcgtcttgagaaaatgggattatcaggaaaaattgatgttgatgcattgattgatattt 280
Query: 281 caaaaattaggagtataagctttgcacataattccttttcgggtccgattcctgaattat 340
| | | || | | ||||||| |||| |||||| ||||||||| ||||||||||||||
Sbjct: 281 ccggactcagaactgtaagcttcgcacgtaattctttttcgggttcgattcctgaattaa 340
Query: 341 atcgtttagactatttgaagaatatttatttaatgggaaatgaattttcaggtgaaatac 400
|||||||| ||| |||||| |||| || | ||||| | ||||||||||| ||||
Sbjct: 341 gtcgtttagggtatctgaagagcattttcttgacaggaaaccagttttcaggtgagatac 400
Query: 401 catcagatttctttctaaaaatgcattccttgnnnnnnntttggttatcagacaacaagt 460
||||||||||||| | |||||| ||| ||| ||||| | || || |||||||
Sbjct: 401 catcagatttcttcttgaaaatggtttcattgaagaaagtttggctttcggataacaagt 460
Query: 461 ttactggagaaatcccatcgtcattgatttatttaacaaatcttatggaattgcatcttg 520
|| |||| ||||| ||||| ||||| ||| ||||| | |||||| | ||||||| | | |
Sbjct: 461 tttctggtgaaattccatcttcattaattcatttatccaatcttcttgaattgcgtttgg 520
Query: 521 aaaataatcaatttactgggactattccatttgtgaaacattcaagattg-caaggggtc 579
|||| ||| |||||| ||| | ||||||| | | | || |||| |||| ||| |
Sbjct: 521 aaaacaatgaatttagtggtaacattccatctatagagcaatcaacattgacaa-----c 575
Query: 580 attcaatgtgtcaaataataagttaagagggcaaattcctgctggtttattgaaattca 638
||||||||||||||| |||||||||||||||||||| || ||||||||| ||||||||
Sbjct: 576 attcaatgtgtcaaacaataagttaagagggcaaatcccagctggtttagagaaattca 634
Score = 113 bits (57), Expect = 4e-24
Identities = 339/433 (78%)
Strand = Plus / Plus
Query: 1066 gaagggtgtttttgggttaatagatttgatgaaagcttctgcagaagttcttggaaatgg 1125
|||||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||
Sbjct: 1041 gaagggtgttttcgggttgccagatttgatgaaagctgctgcagaagtgcttggaaatgg 1100
Query: 1126 ggcgttaggttcttcttataaagctgttatggctaatggcgcaactgttgtggttaagag 1185
| ||||| ||||| ||||| ||| | ||| | |||||| | | |||||||| ||
Sbjct: 1101 tggattagggtcttcatataaggctttgatgaccgatggcgaggcaatggtggttaaaag 1160
Query: 1186 attgagagaaatgaatgcattgggaaatgataaatttgatgcagagattagaaagcttgc 1245
| | ||||||||||||||| | |||| ||| ||||||||||||| | || | ||||
Sbjct: 1161 actcagagaaatgaatgcactaggaagagatggatttgatgcagaggtcaggcatcttgg 1220
Query: 1246 aactttgaagcatgctaatattttaacaccattggcttttcattacaggaaggatgagaa 1305
|| | | |||| |||||||||| ||||||||| |||||||| |||| ||||||||
Sbjct: 1221 aaaactaaggcatcctaatattttgggaccattggcatttcattatcggaaagatgagaa 1280
Query: 1306 gcttttgatctatacctttatacctaaaggcagtttgctctatttgttgcatggcgatag 1365
| | ||||| ||| | || |||| ||||| || || ||||| |||||||| |||||
Sbjct: 1281 gttgttgatatatgaatacatgcctacgggcagcttactttatttattgcatggtgatag 1340
Query: 1366 gggaccttcacatgcttcgctaaattgggctgctcgtctcaagattgttaaaggaattgc 1425
||||||||||| | || || |||||| || ||||||||||| ||||| |||||||||
Sbjct: 1341 gggaccttcacgtactgaactcaattggcctactcgtctcaaggttgttgtaggaattgc 1400
Query: 1426 aaaaggattgggttatattcacactgaacttacttcttgcgacttgccacatggaaatct 1485
| |||||| || ||| | || |||||||| |||| | |||||||| ||||| |||||
Sbjct: 1401 tagaggattaggctatctacatgctgaactttcttcctttgacttgccccatggcaatct 1460
Query: 1486 aaaatccagcaat 1498
||||| ||||||
Sbjct: 1461 caaatcaagcaat 1473