Jatropha Genome Database
- JcCA0029471.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0029471.20 + phase: 0 /pseudo
(1954 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29933.m001398 Stachyose synthase precursor, putative 1041 0.0
30147.m013899 Stachyose synthase precursor, putative 149 7e-35
>29933.m001398 Stachyose synthase precursor, putative
Length = 2364
Score = 1041 bits (525), Expect = 0.0
Identities = 1526/1856 (82%), Gaps = 7/1856 (0%)
Strand = Plus / Plus
Query: 100 gccaatggccatgtctttctctccgatgtgccggataatataacactcactccttcttct 159
||||||||||||||||||||||| ||| || ||||| || ||||||||||| ||| |
Sbjct: 115 gccaatggccatgtctttctctcttgtgtccctgataacatcacactcactccctctcgt 174
Query: 160 tataccctaaccgacaaatcattgtccaccgtcggagcgtttctcgggttcgaatctacc 219
||| |||| || |||||||||| | ||||||||| | || |||||||||| || |
Sbjct: 175 tatgccctcacagacaaatcatcaactaccgtcggatctttcatcgggttcgactcgatg 234
Query: 220 gaacccaaggaccgccacattgtccctatcggaaaattgaagaacatcaagttcatgagc 279
||| ||||||| || || || | | || |||||| | |||||||| ||||| ||||||
Sbjct: 235 gaatccaaggatcgacatgttatttccataggaaaactcaagaacataaagtttatgagc 294
Query: 280 attttccgatttaaagtctggtggactacccattgggtcggatcaaatggcaaagacctc 339
|||||| | || || ||||||||||||||||||||||| || || |||||| ||||||
Sbjct: 295 attttcaggttcaaggtctggtggactacccattgggttggctctaatggccgagacctt 354
Query: 340 gaaaatgaaacccaaattgttgttcttgataagtcggattcgggtcgaccctacatcctt 399
||||||||||| ||||| || ||||||||||||| || || || || || || || ||
Sbjct: 355 gaaaatgaaactcaaatgcttattcttgataagtctgactctggccgtccttatattcta 414
Query: 400 cttcttcctttaatcgaaggtccatttcgggcctctctccaatcaggagaggatgacaac 459
|| || ||| | | || |||||||| ||||| || | || | ||| | || || |||
Sbjct: 415 ctactccctctgcttgagggtccattccgggcatcattacagcccggaaacgacgataac 474
Query: 460 atcgacatatgcgttgaaagtggatcaacgaaagtcaccggcgccggattccggagtgtt 519
|| ||||| || || ||||||||||| |||||||| | || ||||||| |||||||
Sbjct: 475 attgacatttgtgtcgaaagtggatcgacgaaagtgttggcggctggattccagagtgtt 534
Query: 520 ctttacatgcacatcggcgacgatccgttcactttagtgaaagatgctatgaaggtaatt 579
|||||| |||| || ||||| ||||||| || ||||| || ||||| ||||| | ||
Sbjct: 535 ctttacgtgcatattggcgatgatccgtacaagttagtaaaggatgcaatgaaaattgtt 594
Query: 580 agggttcatttaggtactttcaggcttttagaagaaaagacagctcctggtatagtggac 639
| ||||||||||||||| || | ||| || || || || | | ||||| ||||| ||
Sbjct: 595 aaggttcatttaggtacgtttaagctgttggaggagaaaaacccacctggaatagtcgat 654
Query: 640 aagtttggatggtgtacatgggatgcattttaccttacggtgcaccctcaaggtgtatgg 699
|||||||| ||||||||||||||||||||||| ||||| ||||| |||||||| | |||
Sbjct: 655 aagtttgggtggtgtacatgggatgcattttatcttactgtgcatcctcaaggcatttgg 714
Query: 700 gaaggtgttaaaggtcttgttgaaggtggggtcccacctggcttagtcttgattgatgat 759
||||| ||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||
Sbjct: 715 gaaggagttaaaggtcttgttgatggtgggtgcccacctggtttagtgttgattgatgat 774
Query: 760 ggatggcaatctattagtcatgatgaagatccaatcagtaaagaaggaatgaatcacacg 819
|| |||||||||||||| |||||||| ||||| || | ||||||||| |||||| |
Sbjct: 775 gggtggcaatctattagccatgatgaggatcctattactaaagaaggtatgaatgctgct 834
Query: 820 gctgctggtgagcaaatgccatgcaggctactaaaatttgaagagaactataaatttagg 879
| || || ||||| ||||||||||||||| | || ||| |||| || || ||||||||
Sbjct: 835 gtagcaggcgagcagatgccatgcaggctattgaagtttcaagaaaattacaaatttaga 894
Query: 880 gattatgtgagtcccaagagtttggccaatgg---ttct-aatactaagggcatgggtgc 935
|| || || ||||| || |||||||||||||| | || || || ||||| ||||||||
Sbjct: 895 gactacgtcagtcctaaaagtttggccaatggcagtactgaaaacaaaggg-atgggtgc 953
Query: 936 ctttattaaggacctcaaagaggagtttaatactattgattatgtttatgtttggcatgc 995
|||||||||||||| || |||||||||| | | |||||||||| ||||||||||||||
Sbjct: 954 ttttattaaggaccttaaggaggagtttagcagtgttgattatgtgtatgtttggcatgc 1013
Query: 996 attatgtgggtattggggtgggttaagacctaatgtacctggcttgccggaaacagtggt 1055
| ||||||||||||||||| | || || ||||| ||||| ||||||| || |||||
Sbjct: 1014 tctctgtgggtattggggtggcctgaggccaaatgtgcctggactgccggatactgtggt 1073
Query: 1056 gatgaagcctaaattgtcaccgggactggagttaaccatggaggatctcgcggttgataa 1115
| | ||||| |||||||| |||||||||||||| || ||||||||||||||||| |||||
Sbjct: 1074 ggttaagccaaaattgtctccgggactggagttgactatggaggatctcgcggtggataa 1133
Query: 1116 gattgtgagtaatggcgtgggacttgtgccgccagagatagttgatcaattgtacgaggg 1175
|||||| |||| ||||||||| | |||||||| |||| ||||| ||| |||| || ||
Sbjct: 1134 gattgttagtactggcgtggggttggtgccgccggagacggttgagcaaatgtatgaagg 1193
Query: 1176 tcttcactctaatttnnnnnnngtcggcattgatggcgtgaaggtggacgttattcattt 1235
|| ||||| | || || || |||||||| || || || |||||||| |||||
Sbjct: 1194 gctccactcgcacttgcaaaatgttggaattgatggtgtcaaagtagacgttatccattt 1253
Query: 1236 gctagaaatgctgtgtgaagattatggaggcagagtaaatcttgcaaaggcatattacaa 1295
||| ||||||||||| ||| | || ||||| |||||| | | |||||||||||||||||
Sbjct: 1254 gctggaaatgctgtgcgaaaactacggagggagagtagacttagcaaaggcatattacaa 1313
Query: 1296 ggccttgactgcctctgtaagaaaacatttcaatggaaatggtgtaatagctagcatgga 1355
||| |||| ||||| ||||| || |||||||| |||||||| |||||||||||||||||
Sbjct: 1314 ggcactgacagcctcagtaaggaagcatttcaacggaaatggcgtaatagctagcatgga 1373
Query: 1356 acactgcaacgatttcatgtttcttggaactgaaaccatctctcttggtcgcgttggtga 1415
||||||||| ||||||||||| ||||| ||||| | || | ||||||||| ||||||||
Sbjct: 1374 acactgcaatgatttcatgttccttggtactgaggcaatttgtcttggtcgtgttggtga 1433
Query: 1416 tgatttttggtgcactgatccatctggtgatcccaacggtacattttggcttcaaggttg 1475
|||||| ||||||||||||||||| |||||||| ||||| || |||||||| || || ||
Sbjct: 1434 tgatttctggtgcactgatccatccggtgatccaaacggcacgttttggctacaggggtg 1493
Query: 1476 tcacatggtccactgtgcttacaatagcttgtggatgggcaatttcatacacccagattg 1535
||||||||| ||||| |||||||||||| ||||||||||||| |||||||| ||||||||
Sbjct: 1494 tcacatggtgcactgcgcttacaatagcctgtggatgggcaacttcatacatccagattg 1553
Query: 1536 ggacatgttccaatctacacatccttgtgctgaattccatgctgcttctagggcaatttc 1595
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1554 ggacatgttccaatctactcatccttgtgctgaattccatgctgcttctcgggcaatttc 1613
Query: 1596 tggcggaccaatttacgttagcgactctgtcggaaagcacaatttcccgttgctcaagcg 1655
||| || || |||||||| || || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 1614 tggtggtccgatttacgtcagtgattctgttggaaagcacaacttccctttgcttaagcg 1673
Query: 1656 tctagtcttgccggacggttcaattctccgatgtcaatactatgctcttcctacaagaga 1715
||| || ||||| ||||| || |||||||| || || ||||||||||||||||| |||||
Sbjct: 1674 tctcgtgttgcccgacggctccattctccggtgccagtactatgctcttcctaccagaga 1733
Query: 1716 ttgcctctttgaggatcctctccatgatggcaaaaccatgcttaaaatttggaacctcaa 1775
|||||||||||||||||| || || |||||||| || ||||| |||||||||||||||||
Sbjct: 1734 ttgcctctttgaggatccccttcacgatggcaagacaatgctcaaaatttggaacctcaa 1793
Query: 1776 taagtttactggagttattggtgcatttaactgccaaggaggaggctggaacagagagac 1835
| |||||||||||| ||||| | |||||| || ||||||||||| ||| | | |||||
Sbjct: 1794 caggtttactggagtcattggagtatttaattgtcaaggaggaggatggtgccgcgagac 1853
Query: 1836 tagacgcaaccaatgtgcctctacaattttccaacttggtgaccgctaaaaccaatacca 1895
|||||||||| ||||||||||| |||||||| | |||||||| |||||||||||| |
Sbjct: 1854 tagacgcaacaaatgtgcctct-caattttctcatttggtgactgctaaaaccaat-gct 1911
Query: 1896 aaagacattgaatggaacagtggcaagaacccaatttccattgaaggagtacaagt 1951
||||||||||||||||| | ||| | || |||| ||| |||||||||||||||||
Sbjct: 1912 aaagacattgaatggaagaatggaacaaatccaaattcaattgaaggagtacaagt 1967
>30147.m013899 Stachyose synthase precursor, putative
Length = 2337
Score = 149 bits (75), Expect = 7e-35
Identities = 258/319 (80%)
Strand = Plus / Plus
Query: 1457 cattttggcttcaaggttgtcacatggtccactgtgcttacaatagcttgtggatgggca 1516
|||||||||| ||||| ||||| ||||| |||||||| || |||||| ||||| | | ||
Sbjct: 1451 cattttggctacaagggtgtcatatggtgcactgtgcctataatagcctgtggctagcca 1510
Query: 1517 atttcatacacccagattgggacatgttccaatctacacatccttgtgctgaattccatg 1576
|||||||| ||||||||||||||||||| ||| |||| || |||| || ||||| ||||
Sbjct: 1511 atttcatatacccagattgggacatgtttcaaactactcaccctttagcagaatttcatg 1570
Query: 1577 ctgcttctagggcaatttctggcggaccaatttacgttagcgactctgtcggaaagcaca 1636
|||| || ||||| |||||||| ||||||||||| | |||||| | | ||| | ||||
Sbjct: 1571 ctgcatcaagggccatttctggaggaccaatttatataagcgaccgtataggagaacaca 1630
Query: 1637 atttcccgttgctcaagcgtctagtcttgccggacggttcaattctccgatgtcaatact 1696
| ||| | |||| ||| | || | |||||||| ||||| || || || || |||| |
Sbjct: 1631 acttcaagctgctaaagaggctgatgttgccggatggttccatcctacgttgccaatctt 1690
Query: 1697 atgctcttcctacaagagattgcctctttgaggatcctctccatgatggcaaaaccatgc 1756
|||| |||||||| ||||||||||| ||||| || ||| | || ||||| ||||| ||||
Sbjct: 1691 atgcacttcctactagagattgcctatttgatgaccctttacacgatggaaaaacaatgc 1750
Query: 1757 ttaaaatttggaacctcaa 1775
|||| ||||||||||||||
Sbjct: 1751 ttaagatttggaacctcaa 1769
Score = 67.9 bits (34), Expect = 2e-10
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 921 taagggcatgggtgcctttattaaggacctcaaagaggagtttaatactattgattatgt 980
|||||| |||||||| ||||||| ||| ||||||||||| |||| ||| | ||| ||||
Sbjct: 915 taagggtatgggtgcttttattagggatctcaaagaggaatttaggactgtggataatgt 974
Query: 981 ttatgtttggcatgcatt 998
|||||||||||||||||
Sbjct: 975 atatgtttggcatgcatt 992