Jatropha Genome Database
- JcCA0029141.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0029141.10 - phase: 0 /partial
(1906 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29693.m002052 starch synthase, putative 1296 0.0
30005.m001301 hypothetical protein 105 1e-21
>29693.m002052 starch synthase, putative
Length = 2997
Score = 1296 bits (654), Expect = 0.0
Identities = 1095/1242 (88%)
Strand = Plus / Plus
Query: 665 acttatgggaaaaagtggaaaatttgcaagccttgcttgagaaggcaacaaaacaagcag 724
|||| |||||||| ||||| | ||| ||||| || || || |||||||| ||||||||||
Sbjct: 932 acttgtgggaaaaggtggagactttacaagcattactagacaaggcaacgaaacaagcag 991
Query: 725 atcaggctattctagtgttacagcaaaaccaggagctcagaaagaaggttgataaattgg 784
|||||||||||||||||||||| ||||||||||||||| | ||||| |||||||||||||
Sbjct: 992 atcaggctattctagtgttacaacaaaaccaggagctccggaagaaagttgataaattgg 1051
Query: 785 aagaatccttggaagaagccaatgtctacaagctatcgtcagaaaaattgcagcaatcta 844
|||| |||||||||||||| |||| ||| |||||||||||||||||||||||||||| ||
Sbjct: 1052 aagagtccttggaagaagcaaatgcctataagctatcgtcagaaaaattgcagcaatata 1111
Query: 845 atgaactaatgcagcaaaagataaaattattggaggaacgtcttcaaaggtctgatgaag 904
||||| | |||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1112 atgaattcatgcagcaaaagatgaagttattggaggaacgtcttcaaaggtctgatgaag 1171
Query: 905 aaataggttcttatgtccaagtatatcaagaatctgtacaggaatttcaagatacactta 964
||||| ||||||||| |||||||||||||||| || ||||||||||||| ||||
Sbjct: 1172 aaataaattcttatgttagcttatatcaagaatctgtgcaagaatttcaagatatgctta 1231
Query: 965 atactttgaaagaacaaagcaagaaaaaggcactagatcaacctgtagatgatatgcctt 1024
||| | | |||||| ||||||||||||||||||||||| |||||||| |||||||||| |
Sbjct: 1232 atattgtaaaagaagaaagcaagaaaaaggcactagatgaacctgtaaatgatatgccgt 1291
Query: 1025 gggaattttggagtcgtttattgcttatgattgatggttgggtgcttgaggaaaaattat 1084
||||||||||||| | ||||||||||||||||||||| ||| ||||||| | ||| |||
Sbjct: 1292 gggaattttggagccatttattgcttatgattgatggctggctgcttgaaaagaaaatat 1351
Query: 1085 caaaagaaaatgcaaagctgttgagagatatggtgtggaaaagagataggcgcgtttgtg 1144
|| ||| ||||||||||||| |||||||||| ||||||||||||||| || ||
Sbjct: 1352 cagcagatgatgcaaagctgttacgagatatggttcagaaaagagataggcgtattcatg 1411
Query: 1145 atgcttacttggaatgcagggaaaagaatgaccgtgaagctgtttccacgtttctcaagc 1204
| | || || || ||||| |||| ||||| ||||||| | || | |||||||||||
Sbjct: 1412 acacatattttgagtgcagacaaaaaaatgagaatgaagctatatctatgtttctcaagc 1471
Query: 1205 tcacatcatcaccagcaagttcaggattgcatgtcattcatattgctgcagagatggcac 1264
| |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 1472 tgacatcatcaccaagcagtccaggattgcatgtcattcatattgcagcagagatggcac 1531
Query: 1265 cagttgctaaggttggtggtttgggagatgttgtgactggtcttggaaaagcactgcaaa 1324
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 1532 cagttgctaaggttggtggtttgggagatgttgtggctggtcttggcaaagcactgcaaa 1591
Query: 1325 agagaggacatcttgtggaaattattctgcctaaatacgattgcatgcaatatgatggta 1384
|||||||||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||
Sbjct: 1592 agagaggacaccttgtggaaatcattctgcctaaatatgattgcatgcaatataatggta 1651
Query: 1385 ttggcaatttgagggctctagatgtggtcgtggaatcatattttgatggcaaattataca 1444
|||| || || ||||| || |||||| |||||||||||||||||||||||||||||||
Sbjct: 1652 ttggtaacttaagggccctggatgtgactgtggaatcatattttgatggcaaattataca 1711
Query: 1445 aaaataaaatatgggttggcaccattgaaggtcttcctgtttattttattgagcctcatc 1504
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1712 aaaacaaaatatgggttggcactattgaaggtcttcctgtttattttattgagcctcatc 1771
Query: 1505 accctaacaagtttttctggagagggcagttttatggggagcatgatgatttcaaacgct 1564
| ||| ||||||| || ||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 1772 atcctgacaagttcttttggagagggcaattttatggagagcatgatgatttcaaacgct 1831
Query: 1565 tttcatttttcagccgagctgcacttgagttgcttcttcaagccggcaaaaaaccagaca 1624
|||||||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||
Sbjct: 1832 tttcatttttcagccgtgctgcacttgagttgcttcatcaatctggcaaaaaaccagaca 1891
Query: 1625 taattcattgccatgactggcagacagcctttgttgcgccactttactgggatatttacg 1684
|||| || | ||||||||||||||| || |||||||| || || || |||||| | || |
Sbjct: 1892 taatacactcccatgactggcagacggcttttgttgcacctctatattgggatctatatg 1951
Query: 1685 cccccaaaggattgaattcagctagaatttgctttacatgtcataactttgagtatcaag 1744
||||||||||||| |||||||||||||| || |||||||| || ||||||||||| ||||
Sbjct: 1952 cccccaaaggattaaattcagctagaatatgttttacatgccacaactttgagtaccaag 2011
Query: 1745 ggactgcacctgcatcagagctggtatcttgtggacttgatgtccaggagctaaatagac 1804
||||||| ||||||||||| ||| ||||||||| ||||||||||| | ||||||||||
Sbjct: 2012 ggactgcccctgcatcagaattggcatcttgtggccttgatgtccatcatctaaatagac 2071
Query: 1805 cagataggatgcaggacaactcagcacatgataggatcaatcctgttaagggtgcagtgg 1864
||||||| |||||||| || | ||||||||||| ||||||||||| |||||||| ||||
Sbjct: 2072 cagatagaatgcaggataatttggcacatgatagaatcaatcctgtcaagggtgcggtgg 2131
Query: 1865 tgttctcaaacattgtcacaactgtatcacccacctatgcac 1906
|||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 2132 tgttctcaaacattgtgacaacagtatcgcccacctatgcac 2173
Score = 436 bits (220), Expect = e-121
Identities = 436/508 (85%)
Strand = Plus / Plus
Query: 32 atggaggagagaagctttctagtattcctgatgaaatgaaaccttcgggcttaaaaatag 91
||||||||||| ||||||| ||||| ||||||||||| ||| ||||||| ||||||||||
Sbjct: 422 atggaggagaggagctttcaagtatccctgatgaaataaaatcttcgggattaaaaatag 481
Query: 92 agggcggggagcaattttcacatgtccgacttgaggatttgattggcatgataagaaatg 151
| || || |||||| ||||| || | ||||||||||||||| ||||||||||||||||
Sbjct: 482 atggtggagagcaactttcaagagttcaacttgaggatttgataggcatgataagaaatg 541
Query: 152 cagagaaaaacatccttcttctcaatcaagctcgggtccatgcactagaagatcttgaaa 211
|||||||||| ||||| |||||||||||||||||||| ||||||| || |||||| |||
Sbjct: 542 cagagaaaaatatcctgcttctcaatcaagctcgggttaatgcacttgaggatcttcaaa 601
Query: 212 gaattcttgctgagaaggaaatattgcaaggggaaattaatgttttggagatgagattgg 271
||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 602 gaattctagctgagaaggaaatattgcaaggggaaattaatattttggaaatgagattgg 661
Query: 272 cagaaactgatgcaagaatgaaggttgctgcccaagaaaagatacatgtggaactcatgg 331
||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 662 cagaaactgatgcgaggatgaaggttgctgcccaagaaaagatacatgtggacctcatgg 721
Query: 332 gggatcagttagagaagctaaagaatgaactgacttataggggagaaaaccaggacaaac 391
|| ||||||||||| ||| |||||| || |||| ||| | || |||||| || ||
Sbjct: 722 aagaccagttagagaaattaagaaatgaattggcttacaggagtgagaaccagagcagac 781
Query: 392 ttttgaatgaggagccctccttgcttcaaaatagtagtgttgattatcttagtgaggagc 451
||||||||||||| | | ||||||| | | || | || ||| || ||||||||||
Sbjct: 782 ttttgaatgaggatgtccctctgcttcaggacactactcttcattccctcagtgaggagc 841
Query: 452 ttaatttattgagggcagagaattcatccctgaaaaatgatatggaagcacttaagaggg 511
|||||| |||| ||| ||||||| | || |||||||||||||| ||||| |||||| ||
Sbjct: 842 ttaattcattgcgggaagagaatacttcactgaaaaatgatatagaagcgcttaagttgg 901
Query: 512 agcttagtgatgttaaggatacagatga 539
|||||||| |||||||||||||||||||
Sbjct: 902 agcttagtaatgttaaggatacagatga 929
>30005.m001301 hypothetical protein
Length = 573
Score = 105 bits (53), Expect = 1e-21
Identities = 89/101 (88%)
Strand = Plus / Plus
Query: 1281 tggtttgggagatgttgtgactggtcttggaaaagcactgcaaaagagaggacatcttgt 1340
||||||||||||||||||| |||||||||| |||||||||||||| |||||| || |
Sbjct: 2 tggtttgggagatgttgtggctggtcttggcaaagcactgcaaaaaggaggactcctcat 61
Query: 1341 ggaaattattctgcctaaatacgattgcatgcaatatgatg 1381
|||||| |||||||||||||| |||||| || |||||||||
Sbjct: 62 ggaaatcattctgcctaaatatgattgcgtgtaatatgatg 102