Jatropha Genome Database
- JcCA0029051.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0029051.20 + phase: 0
(1428 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006436 conserved hypothetical protein 224 1e-57
29782.m000120 aldehyde dehydrogenase, putative 68 2e-10
>30169.m006436 conserved hypothetical protein
Length = 1128
Score = 224 bits (113), Expect = 1e-57
Identities = 370/456 (81%), Gaps = 6/456 (1%)
Strand = Plus / Plus
Query: 712 tgcatagcaattgattatattcttgtggagaagagatttgcttccactttggtggaatta 771
|||||||||||||||||||| || ||||| |||||||| ||| ||||||| | |
Sbjct: 616 tgcatagcaattgattatatcctggtggaacagagattttctttcactttgct------a 669
Query: 772 atgaaggttgccatcaagaatgtgttgggggataatccaagagaatcaaataccattgca 831
|||| |||||||||||||| |||| ||||| |||||||| || | |||||||| |||
Sbjct: 670 ttgaaagttgccatcaagaagatgtttggggacgatccaagaaaaacgaataccatcgca 729
Query: 832 agaatcattaacaaacagcaatttttgagattgaaaaatcttttaagcaatttgaacgtt 891
||||| | |||||||| || || |||||| |||| |||||| |||| ||||| ||
Sbjct: 730 agaatggtcaacaaacaccatttcttgagagtgaagaatcttataagtgatttggcagtc 789
Query: 892 caaaagtctgttgtctatggtggttcaatggatgaagagaatctgtttattgaaccgata 951
||||| ||||| |||||||||||||| ||||| ||||| | ||||||||| || ||||
Sbjct: 790 caaaaatctgtcgtctatggtggttccatggacgaagacagtctgtttatcgagccgacg 849
Query: 952 atcttagtagatcctcccattcaatcagaaataatgacagaagaaatatttggtccactg 1011
||||| || ||||||| || ||||||| |||||||| ||||| ||||||||| ||
Sbjct: 850 atcttgctaaatcctcctcttggcgcagaaattatgacagatgaaatctttggtccattg 909
Query: 1012 cttcctataattacattagacaagattgaagacagtattgaatttataaattcaaggcct 1071
||||||||||| |||||| ||||||||||||| | | ||||||||||||||||| |||
Sbjct: 910 cttcctataatcacattaaacaagattgaagataacactgaatttataaattcaatgccc 969
Query: 1072 aaaccacttgcaatttatgccttcaccaaaagtgaaccgtttaagaagagaatgatagca 1131
|| ||||||| || ||||||||||| |||| |||| || | || ||||||| ||||
Sbjct: 970 aaggcacttgctatatatgccttcactaaaaacgaacacttcaggagaagaatgacagca 1029
Query: 1132 gaaacatcatcaggaagcttagtattcaatgatgca 1167
|||||||||||||||||||| || ||||||||||||
Sbjct: 1030 gaaacatcatcaggaagcttggtgttcaatgatgca 1065
Score = 113 bits (57), Expect = 3e-24
Identities = 81/89 (91%)
Strand = Plus / Plus
Query: 103 tttaaggctctgaaggaggatttagggaaacatcatgttgaggcttttagagatgaggta 162
||||||||||| ||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 142 tttaaggctctcaagcaggatttagggaaacatcacggtgaggcttttagagatgaggtt 201
Query: 163 ggaaccgtaataaaatccattaattatgc 191
|||||| |||||||||||| ||||||||
Sbjct: 202 ggaacctcaataaaatccataaattatgc 230
Score = 111 bits (56), Expect = 1e-23
Identities = 171/208 (82%), Gaps = 1/208 (0%)
Strand = Plus / Plus
Query: 326 gactgtccttggaaccacttataggagcaatagctgcaggaaatacagcggttttgaagc 385
|||||||||||||||| ||||||||| ||||||||||||||||||| |||| | || |
Sbjct: 327 gactgtccttggaaccgattataggagtaatagctgcaggaaatacaatggttctaaaac 386
Query: 386 catcggaattggctcctgctacttcttctcttctggcaaatactctgatcaactaccttg 445
| || ||| ||| ||||||| ||||| ||||||| || |||||| || || || ||||
Sbjct: 387 cttcagaa-tgggtcctgcttcttctgctcttctagcgaatactttgcctaattatcttg 445
Query: 446 acaataacgctatcaaaatcatccaaggaggatcatctgtcggtgaacaactcctccatc 505
||||||| || ||||| |||||||||| ||| | ||||| || ||||||||||| | |
Sbjct: 446 acaataaagccatcaaggtcatccaaggcggaccttctgttggcgaacaactcctgctgc 505
Query: 506 acaaatgggacaagattttctttacagg 533
| |||||||| ||||||| |||||||||
Sbjct: 506 agaaatgggataagatttcctttacagg 533
>29782.m000120 aldehyde dehydrogenase, putative
Length = 3153
Score = 67.9 bits (34), Expect = 2e-10
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 976 tcagaaataatgacagaagaaatatttggtccactgcttcctataattacattagacaag 1035
||||| |||||||| | ||||| |||||||| ||||||| ||||| ||||| | ||
Sbjct: 919 tcagagataatgacgcaggaaatttttggtcctttgcttccaataatcacattgaataat 978
Query: 1036 attgaagacagtattgaatttataaattcaaggcctaaaccacttgcaatttatgccttc 1095
||| |||| || |||||||| ||||| |||||||| ||| | ||||| ||||||||||||
Sbjct: 979 attcaagaaagcattgaattcataaactcaaggccaaaatctcttgccatttatgccttc 1038
Query: 1096 ac 1097
||
Sbjct: 1039 ac 1040