Jatropha Genome Database
- JcCA0028681.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0028681.10 - phase: 0 /partial
(1404 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30041.m000240 isopropylmalate synthase, putative 1063 0.0
>30041.m000240 isopropylmalate synthase, putative
Length = 1899
Score = 1063 bits (536), Expect = 0.0
Identities = 971/1116 (87%)
Strand = Plus / Plus
Query: 289 actctccgcgatggcgaacagtctcccggcgccactctcacctccaaggaaaagcttgac 348
||||||||||| ||||||||||| || ||||| || || ||||| || || || || |||
Sbjct: 280 actctccgcgacggcgaacagtcccctggcgcaacgctaacctcgaaagagaaactcgac 339
Query: 349 atcgctcgccatctttcgaagctcggcgtcgacataatagaagctggatttcctgcggca 408
|| |||||||| | ||||| ||||| || ||||| || ||||| || ||||| |||||
Sbjct: 340 atagctcgccaattgtcgaaactcggggtggacattatcgaagccggctttccggcggct 399
Query: 409 tctaatgatgattttgaggctgtgaaaaccattgctaaagaagtgggtaatgcggtggat 468
||||| |||||||||||||| |||||||| ||||| ||||||||||| |||||||| |||
Sbjct: 400 tctaaagatgattttgaggcagtgaaaacgattgcgaaagaagtgggaaatgcggttgat 459
Query: 469 gatgagggatacgtaccggttatttgtggattgtcgaggtgcaatgagaaggacatcaaa 528
|| || || || || ||||| || ||||||||||||||||| |||||||| || |||| |
Sbjct: 460 gaggatggttatgtgccggtgatatgtggattgtcgaggtgtaatgagaaagatatcaga 519
Query: 529 actgcctgggaggctgtgaagtatgccaagaggccgaggattcacacgttcattgcgacg 588
||||| |||||||| || |||||||| || ||||| | ||||| || || || || ||
Sbjct: 520 actgcttgggaggcggttaagtatgcaaaaaggccccgaattcatacctttatagccacc 579
Query: 589 agtgagatccatatgcagtacaagttgaggaagagtaaagaggaggtggtggagatcgct 648
|||| ||| || ||| |||| ||||||||||||||||||||||| || || |||||||||
Sbjct: 580 agtgcgatacacatggagtataagttgaggaagagtaaagaggaagtcgttgagatcgct 639
Query: 649 acaaatatggttaagtttgctaggagtttgggttgtgatgacgtcgaatttagccctgaa 708
| || |||||||||||||||||| || ||||| |||||||| || || ||||||||||||
Sbjct: 640 agaagtatggttaagtttgctagaagcttggggtgtgatgatgttgagtttagccctgaa 699
Query: 709 gatgctggcagatctgacagagagttcttgtaccatattttgggtgaagttatcaaggcc 768
|||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 700 gatgctggaagatctgacagagagttcttgtatcatatcttgggtgaagttatcaaggct 759
Query: 769 ggtgctacaactcttaacattcctgatactgttggtataacgctgcctagtgaatttgga 828
||||| |||||||| ||||| ||||| |||||||||||||| | |||||||||||||||
Sbjct: 760 ggtgcaacaactctgaacatacctgacactgttggtataactttacctagtgaatttgga 819
Query: 829 cagttgattgctgatataagagctaatacgcctggaattgaaaatgtcattatttcaaca 888
|||||||| ||||| |||| ||| ||||| ||||||||||| || |||||||| ||||||
Sbjct: 820 cagttgatagctgacataaaagccaatacacctggaattgataaggtcattatctcaaca 879
Query: 889 cactgccaaaatgatcttggactttctacggctaacaccttagcagggacatatgcaggt 948
|| |||||||||||||||||||||||||| || ||||| ||||| ||| |||||||||||
Sbjct: 880 cattgccaaaatgatcttggactttctactgccaacactttagcgggggcatatgcaggt 939
Query: 949 gccagacaagtggaagtaacagtcaatggaattggtgaaagagctggtaatgcttcattg 1008
|| |||||||||||||||||| | ||||| ||||||||||| ||||| |||||||||||
Sbjct: 940 gcaagacaagtggaagtaacaattaatggcattggtgaaagggctggaaatgcttcatta 999
Query: 1009 gaggaggttgtaatggctataaaatgtcgtggagagcatgttttaggaggtctttatact 1068
||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||
Sbjct: 1000 gaggaggttgtaatggccataaaatgtcgtggagagcatattctaggaggtctttatact 1059
Query: 1069 ggaattaattctaaacacatcactatggcaagcaagatggtggaagaatatactggtttg 1128
||||| ||| ||| ||| ||||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 1060 ggaatcaatcctagacagatcactatggcaagcaagatggtagaagagtacactggattg 1119
Query: 1129 cacgtgcagccacacaaggcaattgttggagctaatgcttttgctcatgaaagtggcata 1188
|| | |||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 1120 catttacagccacacaaggctattgttggagctaatgcttttgctcatgaaagcggtata 1179
Query: 1189 catcaggatggaatgctaaaacataaaggtacttatgagattatgtcccctgaagatatt 1248
||||||||||||||||||||||| ||||| || |||||||| || || ||||||||||||
Sbjct: 1180 catcaggatggaatgctaaaacacaaaggcacatatgagataatttctcctgaagatatt 1239
Query: 1249 gggcttgaacgagccaatgatgctgggattgtccttggaaaacttagtggtcgccatgct 1308
|||||||| ||| ||||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 1240 gggcttgagcgatccaatgacgctgggatcgtccttggaaaacttagtggccgtcatgca 1299
Query: 1309 ttgaaagatcgactcaaagagcttggttatgagttgagtgatgagcaacttggcaatatc 1368
|| || |||||||| ||||||||||| |||||||||| ||||||||||||||||| |||
Sbjct: 1300 ttaaaggatcgactaaaagagcttggctatgagttgaatgatgagcaacttggcacgatc 1359
Query: 1369 ttttggcgcttcaagtctgttgctgaaaacaaaaag 1404
|||||||| |||||| | || ||||||| |||||||
Sbjct: 1360 ttttggcgtttcaaggcagtagctgaaaccaaaaag 1395